RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 B3GALT4O96024 378 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 TGFB1P01137 390 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 FGF4P08620 206 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 LINC00032P0C843 101 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 UROSP10746 265 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 JAK1P23458 1154 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 LSP1P33241 339 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 OR4D2P58180 307 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 RPS13P62277 151 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 PMP22Q01453 160 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 RHAGQ02094 409 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 C3AR1Q16581 482 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 HIST2H2ACQ16777 129 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 HIST2H2AA3Q6FI13 130 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 CGB2Q6NT52 195 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 WDR75Q8IWA0 830 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 CLYBLQ8N0X4 340 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 AFAP1L2Q8N4X5 818 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 AMER2Q8N7J2 671 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 ZCCHC10Q8TBK6 192 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 CREB3L4Q8TEY5 395 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 SELENOMQ8WWX9 145 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 TBC1D20Q96BZ9 403 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 PEX11GQ96HA9 241 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 MAGED4Q96JG8 741 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 C3orf30Q96M34 536 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 ZNF317Q96PQ6 595 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 OR51B5Q9H339 312 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 KLHL31Q9H511 634 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 ELOVL6Q9H5J4 265 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 NT5DC2Q9H857 520 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 KLHL1Q9NR64 748 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 SH3BGRL2Q9UJC5 107 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 PCDHGA11Q9Y5H2 935 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 POLQO75417 2590 aa12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-213ENST00000448520 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 A0A0G2JN53 185 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 GABRR3A8MPY1 467 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 C4orf51C9J302 202 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 FAM227AF5H4B4 570 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 SAP18O00422 153 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 NDUFS4O43181 175 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ASNA1O43681 348 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 KRT6AP02538 564 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 KRT6BP04259 564 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 FHP07954 510 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 SP1P08047 785 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ALOX12P18054 663 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 HNRNPH1P31943 449 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 KRT6CP48668 564 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 SLC26A5P58743 744 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 HMGCS1Q01581 520 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 OC90Q02509 493 aaPredicted RBP12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 SRSF11Q05519 484 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 BTKQ06187 659 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 HYAL2Q12891 473 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 IFT88Q13099 833 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 RPS19BP1Q86WX3 136 aaKnown RBP12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 PDSS2Q86YH6 399 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 EID3Q8N140 333 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ELP5Q8TE02 316 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 MS4A8Q9BY19 250 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ACPTQ9BZG2 426 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 RHBGQ9H310 441 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 CDCP1Q9H5V8 836 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 LANCL2Q9NS86 450 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 LRFN1Q9P244 771 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ZFP69BQ9UJL9 534 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 SNX6Q9UNH7 406 aa12.84□□□□□ -0.35
PDLIM2-213ENST00000448520 ATP6AP2A0A1C7CYW4 349 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 URADA6NGE7 173 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ANKDD1BA6NHY2 528 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 NPIPA5E9PKD4 350 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF195O14628 629 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 GALR3O60755 368 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 WISP2O76076 250 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 CLDN14O95500 239 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 AHRP35869 848 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ADORA2A-AS1P86434 159 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 RGS1Q08116 209 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 MAPKAPK3Q16644 382 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ABHD13Q7L211 337 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 SHISA5Q8N114 240 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 GHDCQ8N2G8 530 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 UBE2E3Q969T4 207 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms