RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 COX7A2P14406 83 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 CPA3P15088 417 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 NME2P22392 152 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HSD3B2P26439 372 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HMOX2P30519 316 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HTR6P50406 440 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 SSR4P51571 173 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HK2P52789 917 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 MAPK12P53778 367 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 NAGLUP54802 743 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 PKNOX1P55347 436 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 DNAJB13P59910 316 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 RNF4P78317 190 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 PLIN5Q00G26 463 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 NDUFAF5Q5TEU4 345 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 EMBQ6PCB8 327 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 ST13P4Q8IZP2 240 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 C1orf52Q8N6N3 182 aaKnown RBP11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 RDH11Q8TC12 318 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 AGAP11Q8TF27 550 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 CHTF18Q8WVB6 975 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 CAVIN3Q969G5 261 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 TMEM125Q96AQ2 219 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 TM4SF18Q96CE8 201 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 PSMG3-AS1Q96PY0 264 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 KCNA7Q96RP8 456 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 OXSMQ9NWU1 459 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 VPS29Q9UBQ0 182 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 ERRFI1Q9UJM3 462 aaPredicted RBP11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 OSGIN2Q9Y236 505 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 STK38LQ9Y2H1 464 aa11.83□□□□□ -0.52
PRPF40A-203ENST00000448428 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ASPDHA6ND91 283 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 OR10H2O60403 315 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ZNF354AO60765 605 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 SLC35E2P0CK97 266 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 RNF224P0DH78 156 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 PIK3R1P27986 724 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 GALNSP34059 522 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 FOXA1P55317 472 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 KCNK10P57789 538 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 CSTF3Q12996 717 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 OR52E8Q6IFG1 317 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 SCIMPQ6UWF3 145 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 MDGA2Q7Z553 956 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 TRABD2AQ86V40 505 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 SULF2Q8IWU5 870 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 MMP21Q8N119 569 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 CYP4Z2PQ8N1L4 340 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 CCDC63Q8NA47 563 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 OR4K14Q8NGD5 310 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 OR5L2Q8NGL0 311 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 RIT1Q92963 219 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 FBXL20Q96IG2 436 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 FRMD6Q96NE9 622 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 RASL10BQ96S79 203 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 PELOQ9BRX2 385 aaKnown RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ACPTQ9BZG2 426 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ROPN1BQ9BZX4 212 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 ROPN1Q9HAT0 212 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 MID1IP1Q9NPA3 183 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 COPS7AQ9UBW8 275 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 SEC14L3Q9UDX4 400 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 LGALS13Q9UHV8 139 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 CES1P1Q9UKY3 287 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 PLLPQ9Y342 182 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 PCDHA9Q9Y5H5 950 aa11.82□□□□□ -0.52
PRPF40A-203ENST00000448428 WIPF3A6NGB9 483 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 DYRK3O43781 588 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 GUCY1B2O75343 617 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 OR6B1O95007 311 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 UNC5CO95185 931 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 SERPINB3P29508 390 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 SOX3P41225 446 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 XKP51811 444 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 NAA20P61599 178 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 ERVK-8P63133 956 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 HMGCS1Q01581 520 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 ALDH6A1Q02252 535 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 SPRED3Q2MJR0 410 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 ZNF750Q32MQ0 723 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 CFAP157Q5JU67 520 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 RNFT1Q5M7Z0 435 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 IL20RBQ6UXL0 311 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 FRMD7Q6ZUT3 714 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 C9orf40Q8IXQ3 194 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 RIBC1Q8N443 379 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 CPSF7Q8N684 471 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 BANPQ8N9N5 519 aa11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 FAM98AQ8NCA5 519 aaKnown RBP11.81□□□□□ -0.52
PRPF40A-203ENST00000448428 SSC4DQ8WTU2 575 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms