RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 HTR7P34969 479 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 NR4A2P43354 598 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 CD151P48509 253 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 DNASE1L1P49184 302 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 YBEYP58557 167 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 MAXP61244 160 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ACTN3Q08043 901 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 SP140Q13342 867 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 STIM1Q13586 685 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PDK1Q15118 436 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 RAB35Q15286 201 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 EXT1Q16394 746 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 CARTPTQ16568 116 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF750Q32MQ0 723 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 NDUFAF5Q5TEU4 345 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PAPD4Q6PIY7 484 aaKnown RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 TMEM220Q6QAJ8 160 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 C11orf57Q6ZUT1 292 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 NOP9Q86U38 636 aaKnown RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 OR4N4Q8N0Y3 316 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PGBD5Q8N414 524 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 TMEM156Q8N614 296 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 RTL3Q8N8U3 475 aaKnown RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 GPR26Q8NDV2 337 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PSD4Q8NDX1 1056 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 EID2BQ96D98 161 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 C11orf24Q96F05 449 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ADAD1Q96M93 576 aaKnown RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 FOXN4Q96NZ1 517 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 TIMP4Q99727 224 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 C7orf25Q9BPX7 421 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 SUCNR1Q9BXA5 334 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 RSPO3Q9BXY4 272 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ALOXE3Q9BYJ1 711 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 KLHL4Q9C0H6 718 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 SLC39A8Q9C0K1 460 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 CHRNA10Q9GZZ6 450 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 OPN3Q9H1Y3 402 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 LRRC19Q9H756 370 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 MED4Q9NPJ6 270 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 NECAP2Q9NVZ3 263 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 TUBA8Q9NY65 449 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 VSX1Q9NZR4 365 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-205ENST00000447267 ERVK-11Q9UQG0 969 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 CAMK2AQ9UQM7 478 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 SH2B3Q9UQQ2 575 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 DTX4Q9Y2E6 619 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 EML6Q6ZMW3 1958 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 PLCE1Q9P212 2302 aa4.43□□□□□ -1.7
SDCBP-205ENST00000447267 DNAH3Q8TD57 4116 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SNRNP200O75643 2136 aaKnown RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 UQCRHLA0A096LP55 91 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 A0A0J9YYE9 177 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CD8B2A6NJW9 211 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ISM1B1AKI9 464 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PDXKO00764 312 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CCP110O43303 1012 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 B4GALT2O60909 372 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TRBC1P01850 177 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 EIF2S1P05198 315 aaKnown RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TPM3P06753 285 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 NEFHP12036 1026 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 KRT13P13646 458 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 POU2F1P14859 743 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ECHS1P30084 290 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CXCR5P32302 372 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PCGF2P35227 344 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TNNT3P45378 269 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 AVPR1BP47901 424 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 KCNJ5P48544 419 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 DIO3P55073 304 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CDH15P55291 814 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SLC10A7Q0GE19 358 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 STK4Q13043 487 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 MPP3Q13368 585 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TAF9Q16594 264 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SLC25A52Q3SY17 297 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PARP15Q460N3 678 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 MINDY4Q4G0A6 757 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PTPN20Q4JDL3 420 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SFT2D3Q587I9 215 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 DNAJC21Q5F1R6 531 aaKnown RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 RNF187Q5TA31 235 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ICE2Q659A1 982 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ZFAND6Q6FIF0 208 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 FRMPD2BQ6IN97 320 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ADAM5Q6NVV9 412 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PRMT9Q6P2P2 845 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SHQ1Q6PI26 577 aaKnown RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 NT5DC3Q86UY8 548 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PDILTQ8N807 584 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 RASGEF1AQ8N9B8 481 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 GDAP1Q8TB36 358 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ELP5Q8TE02 316 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 NTAN1Q96AB6 310 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 C10orf90Q96M02 699 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 SELENOSQ9BQE4 189 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 HGH1Q9BTY7 390 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms