RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SMIM10Q96HG1 83 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 TMEM19Q96HH6 336 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SOX17Q9H6I2 414 aaPredicted RBP14.82□□□□□ -0.04
SNX13-204ENST00000444712 NDUFAF4Q9P032 175 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 RAB23Q9ULC3 237 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 FAM32AQ9Y421 112 aaKnown RBP14.82□□□□□ -0.04
SNX13-204ENST00000444712 HSPE1-MOB4S4R3N1 261 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SPACA6W5XKT8 324 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 OR5K3A6NET4 321 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 A8MVJ9 347 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 HMGN4O00479 90 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SERPINB7O75635 380 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 FHP07954 510 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 MATN1P21941 496 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 RRM2P31350 389 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 PPP1R8Q12972 351 aaKnown RBP14.82□□□□□ -0.04
SNX13-204ENST00000444712 FZD5Q13467 585 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KEAP1Q14145 624 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 ZNF542PQ5EBM4 170 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 CEP68Q76N32 757 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SZRD1Q7Z422 152 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 GKN2Q86XP6 184 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KRT73Q86Y46 540 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 FAM46DQ8NEK8 389 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 PATE1Q8WXA2 126 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 RLN3Q8WXF3 142 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 HDAC2Q92769 488 aaKnown RBP14.82□□□□□ -0.04
SNX13-204ENST00000444712 CNRIP1Q96F85 164 aaPredicted RBP14.82□□□□□ -0.04
SNX13-204ENST00000444712 TSC22D3Q99576 134 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 LRRC61Q9BV99 259 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 SPATA5L1Q9BVQ7 753 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 AMBRA1Q9C0C7 1298 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 YIPF3Q9GZM5 350 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 KRT84Q9NSB2 600 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 EXD2Q9NVH0 621 aa14.82□□□□□ -0.04
SNX13-204ENST00000444712 CEP192Q8TEP8 1941 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 TNFRSF11BO00300 401 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 PGRMC2O15173 223 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 EMC8O43402 210 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 CTSVO60911 334 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 DIRAS1O95057 198 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 CSF2P04141 144 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 IFNW1P05000 195 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 CPN2P22792 545 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 RYKP34925 604 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 ESRRGP62508 458 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 ZNF691Q5VV52 312 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 C18orf63Q68DL7 685 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 FAHD1Q6P587 224 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 CAMKK1Q8N5S9 505 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 ATG16L2Q8NAA4 619 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 MIPOL1Q8TD10 442 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 MAPKAP1Q9BPZ7 522 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 OR51I1Q9H343 314 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 SYNPO2LQ9H987 977 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 LYRM4Q9HD34 91 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 C2orf42Q9NWW7 574 aa14.81□□□□□ -0.04
SNX13-204ENST00000444712 TDRD6O60522 2096 aaKnown RBP14.81□□□□□ -0.04
SNX13-204ENST00000444712 GLOD5A6NK44 160 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 BCKDKO14874 412 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 RHCEP18577 417 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 ALDH3B2P48448 385 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 HLCSP50747 726 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 DAPP51397 102 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 RPS26P62854 115 aaKnown RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 RACK1P63244 317 aaKnown RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 SIM2Q14190 667 aaPredicted RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 PRAMEF8Q5VWM4 474 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 PRAMEF7Q5VXH5 474 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SDR16C5Q8N3Y7 309 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 BBS10Q8TAM1 723 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SUN3Q8TAQ9 357 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 GIPC3Q8TF64 312 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 PROX1Q92786 737 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 UCN3Q969E3 161 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SPACA7Q96KW9 195 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 FCRL4Q96PJ5 515 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 UCK1Q9HA47 277 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SNX11Q9Y5W9 270 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 LYVE1Q9Y5Y7 322 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 ENPP4Q9Y6X5 453 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 KRBA1A5PL33 1030 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 ASNA1O43681 348 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SLC28A2O43868 658 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 PRKRAO75569 313 aaKnown RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 CELA2BP08218 269 aaPredicted RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 ANXA8P13928 327 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 NME1P15531 152 aaKnown RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 ALOX12P18054 663 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 TTKP33981 857 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 CRISP3P54108 245 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 GABARAPL2P60520 117 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SPIBQ01892 262 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 CYP4Z1Q86W10 505 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 CCDC116Q8IYX3 515 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 SPEM1Q8N4L4 309 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 FAM160A2Q8N612 972 aaPredicted RBP14.8□□□□□ -0.04
SNX13-204ENST00000444712 PIP5K1AQ99755 562 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 APOL4Q9BPW4 351 aa14.8□□□□□ -0.04
SNX13-204ENST00000444712 BTBD2Q9BX70 525 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms