RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CMPK2Q5EBM0 449 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 METTL2BQ6P1Q9 378 aaKnown RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 SPPL2CQ8IUH8 684 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 MMP21Q8N119 569 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 ZFP62Q8NB50 900 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PSD4Q8NDX1 1056 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 OR52N2Q8NGI0 321 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 C16orf52Q8NHV5 167 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM237Q96Q45 408 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 PHF12Q96QT6 1004 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 HBEGFQ99075 208 aa10.07□□□□□ -0.8
SF3A1-203ENST00000444440 MRPL57Q9BQC6 102 aaKnown RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 MRPL1Q9BYD6 325 aaKnown RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 MRPL46Q9H2W6 279 aaKnown RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 KLF13Q9Y2Y9 288 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-203ENST00000444440 A8MVJ9 347 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 GOLGA8RI6L899 631 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SMIM24O75264 130 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 OR4F21O95013 312 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PDYNP01213 254 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SHBGP04278 402 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 CT62P0C5K7 136 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 CCL3P10147 92 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 NR2F6P10588 404 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ALOX15P16050 662 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 TNFRSF8P28908 595 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SOX18P35713 384 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ARL1P40616 181 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 HERVK_113P63132 956 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ERVK-8P63133 956 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 DUSP2Q05923 314 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 GALNT1Q10472 559 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ASPHQ12797 758 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 GGTA1PQ4G0N0 100 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 UNC50Q53HI1 259 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 KRTCAP3Q53RY4 240 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SGO1Q5FBB7 561 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 FRG2Q64ET8 278 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 TIFABQ6ZNK6 161 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 LCA5Q86VQ0 697 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 DOLPP1Q86YN1 238 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 FAM98AQ8NCA5 519 aaKnown RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 OR2M7Q8NG81 312 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 OR8K3Q8NH51 312 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 UBLCP1Q8WVY7 318 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ASB15Q8WXK1 588 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 TMEM125Q96AQ2 219 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SENP5Q96HI0 755 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 MAGED4Q96JG8 741 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 DGAT2Q96PD7 388 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 FRG2BQ96QU4 278 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 C1QTNF3Q9BXJ4 246 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ERVK-6Q9BXR3 956 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PPCSQ9HAB8 311 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 HPF1Q9NWY4 346 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 LYARQ9NX58 379 aaKnown RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PSD3Q9NYI0 1048 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PSMC3IPQ9P2W1 217 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PHF11Q9UIL8 331 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 EMCNQ9ULC0 261 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PPT2Q9UMR5 302 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ERVK-11Q9UQG0 969 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 ERVK-19Q9WJR5 959 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 LIPGQ9Y5X9 500 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 SPACA6W5XKT8 324 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 PDZD2O15018 2839 aa10.06□□□□□ -0.8
SF3A1-203ENST00000444440 INTS1Q8N201 2190 aaKnown RBP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 A0A1W2PPM1 405 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 FAM166BA8MTA8 275 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 ESPNB1AK53 854 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 PRSS44E7EML9 344 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 C19orf84I3L1E1 186 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 TFECO14948 347 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 DLX3O60479 287 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 CDC40O60508 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 PDE9AO76083 593 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SEMA3DO95025 777 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 GPR75O95800 540 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 KLK1P06870 262 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 CHN1P15882 459 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 SSTR4P31391 388 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 HSD17B3P37058 310 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 BUD31P41223 144 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 DNASE1L1P49184 302 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 HTR6P50406 440 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 ARFIP1P53367 373 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 PHEXP78562 749 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 PIGGQ5H8A4 983 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 ZNF678Q5SXM1 525 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 CYP20A1Q6UW02 462 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 MILR1Q7Z6M3 343 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 MRGPRGQ86SM5 289 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 NUDT13Q86X67 352 aa10.05□□□□□ -0.8
SF3A1-203ENST00000444440 ST13P4Q8IZP2 240 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-203ENST00000444440 GHDCQ8N2G8 530 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms