RNA–Protein interactions for RNA: ENST00000442328.1

SYNJ2-IT1-201, SYNJ2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SYNJ2-IT1, Length 599 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-IT1-201ENST00000442328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 NDOR1Q9UHB4 597 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 BTNL2Q9UIR0 455 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 UTS2RQ9UKP6 389 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PRPF19Q9UMS4 504 aaKnown RBP7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PCDHGB4Q9UN71 923 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CLCA2Q9UQC9 943 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SPACA6W5XKT8 324 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ASXL3Q9C0F0 2248 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RP1P56715 2156 aa7.1□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 COL5A1P20908 1838 aaPredicted RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 EFCAB7A8K855 629 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 FAM227AF5H4B4 570 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RNASET2O00584 256 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 NME4O00746 187 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 NVLO15381 856 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PDPK1O15530 556 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 FOXD2O60548 495 aaPredicted RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ERAL1O75616 437 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RFPL3O75679 317 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 C8orf89P0DMQ9 161 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PTPN6P29350 595 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 TLX1P31314 330 aaPredicted RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ARSFP54793 590 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PCBP4P57723 403 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RAB38P57729 211 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 MTPNP58546 118 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 MAT1AQ00266 395 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 E2F1Q01094 437 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 LRRC74AQ0VAA2 488 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 TRA2AQ13595 282 aaKnown RBP eCLIP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CEACAM7Q14002 265 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SELPLGQ14242 412 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SYT16Q17RD7 645 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ZNF750Q32MQ0 723 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RUNDC3AQ59EK9 446 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RABL3Q5HYI8 236 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 LRIF1Q5T3J3 769 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PGM2L1Q6PCE3 622 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 FIGNL1Q6PIW4 674 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RBM44Q6ZP01 1051 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ASCL5Q7RTU5 278 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 BTLAQ7Z6A9 289 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ATCAYQ86WG3 371 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 HPS6Q86YV9 775 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 OR4N5Q8IXE1 308 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 MSRB3Q8IXL7 192 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SLC15A3Q8IY34 581 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 KIAA2013Q8IYS2 634 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CLEC4FQ8N1N0 589 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 FBXW8Q8N3Y1 598 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 NATD1Q8N6N6 113 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 AGBL5Q8NDL9 886 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 OR4A15Q8NGL6 344 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 DNAJB8Q8NHS0 232 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 TMEM125Q96AQ2 219 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RNF31Q96EP0 1072 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ZNF764Q96H86 408 aaPredicted RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PEX11GQ96HA9 241 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 HSH2DQ96JZ2 352 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ANKRD27Q96NW4 1050 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 BBS4Q96RK4 519 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CGREF1Q99674 301 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CTRCQ99895 268 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 THUMPD3Q9BV44 507 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SLC7A5P2Q9GIP4 190 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RPF2Q9H7B2 306 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SPAG4Q9NPE6 437 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SLC35C2Q9NQQ7 365 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ENAMQ9NRM1 1142 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SLC6A13Q9NSD5 602 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 GIMAP4Q9NUV9 329 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CMTM6Q9NX76 183 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SIDT1Q9NXL6 827 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 VAPAQ9P0L0 249 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 TMEM181Q9P2C4 612 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 GMPR2Q9P2T1 348 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 DHCR7Q9UBM7 475 aaKnown RBP7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 CES1P1Q9UKY3 287 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 RARRES3Q9UL19 164 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PSME2Q9UL46 239 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 VPS4AQ9UN37 437 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 ERVK-11Q9UQG0 969 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 L3MBTL1Q9Y468 752 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 PCDHB14Q9Y5E9 798 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 MAU2Q9Y6X3 613 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 UNC13CQ8NB66 2214 aa7.09□□□□□ -1.27
SYNJ2-IT1-201ENST00000442328 SCN3AQ9NY46 2000 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 TRBV5-3A0A0A0MS03 114 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 C15orf38-AP3S2A0A0A6YYH1 394 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 A0A1W2PS29 197 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 MYO1GB0I1T2 1018 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 H0YHG0 523 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 H0YIG0 161 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 CYR61O00622 381 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 DSCR3O14972 297 aa7.08□□□□□ -1.28
SYNJ2-IT1-201ENST00000442328 HYAL3O43820 417 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms