RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 OR51J1Q9H342 316 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 METTL17Q9H7H0 456 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 NMNAT1Q9HAN9 279 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PCDHB16Q9NRJ7 776 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 MAB21L2Q9Y586 359 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SESN1Q9Y6P5 492 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PRRC2BQ5JSZ5 2229 aaKnown RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TRBV5-3A0A0A0MS03 114 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TRBV4-1A0A0J9YWV2 114 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 A0A1W2PPK0 400 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RPS10-NUDT3A0A1W2PQS6 291 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PRR23D1E9PI22 279 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PEX11BO96011 259 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PRR23D2P0DMB1 279 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ANXA8P13928 327 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RHCEP18577 417 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF791Q3KP31 576 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 IFI44LQ53G44 452 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RPS26P11Q5JNZ5 115 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 CLEC12AQ5QGZ9 265 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SBSNQ6UWP8 590 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 OR4A15Q8NGL6 344 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ELMOD3Q96FG2 381 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PKMYT1Q99640 499 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 DOHHQ9BU89 302 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 GABARAPL3Q9BY60 117 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZFP64Q9NPA5 681 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 HPF1Q9NWY4 346 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZFR2Q9UPR6 939 aaKnown RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 NEU3Q9UQ49 428 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF98A6NK75 572 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 STK16O75716 305 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 MT-ND4P03905 459 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TPOP07202 933 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PBLDP30039 288 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PNPLA4P41247 253 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 CBX5P45973 191 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RPL34P49207 117 aaKnown RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SUOXP51687 545 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 GBX2P52951 348 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ATP12AP54707 1039 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 LSM11P83369 360 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 FABP5Q01469 135 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 HSF2Q03933 536 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 GAB1Q13480 694 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TNFAIP1Q13829 316 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF273Q14593 569 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 MICAQ29983 383 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 CRB2Q5IJ48 1285 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SLC6A19Q695T7 634 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TIGD3Q6B0B8 471 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 GPR139Q6DWJ6 353 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 FBXL22Q6P050 247 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TMEM88Q6PEY1 159 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ESPNLQ6ZVH7 1005 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 BHLHA9Q7RTU4 235 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TSEN54Q7Z6J9 526 aaKnown RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PGBD3Q8N328 593 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF527Q8NB42 609 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 FAM46DQ8NEK8 389 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 GANCQ8TET4 914 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 BTN2A2Q8WVV5 523 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RNFT2Q96EX2 444 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 SCRN2Q96FV2 425 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 CINPQ9BW66 212 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF416Q9BWM5 594 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 NLNQ9BYT8 704 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PIGUQ9H490 435 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 RANBP3Q9H6Z4 567 aaPredicted RBP7.18□□□□□ -1.26
HDAC9-214ENST00000441542 PLCXD1Q9NUJ7 323 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 IL20RAQ9UHF4 553 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 FLVCR2Q9UPI3 526 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 MGAT4BQ9UQ53 548 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 CCL27Q9Y4X3 112 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 UBR3Q6ZT12 1888 aa7.18□□□□□ -1.26
HDAC9-214ENST00000441542 TRAV20A0A0B4J274 112 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 hCG_1807616A0A1W2PRN6 198 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 SLC43A1O75387 559 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 CLDN9O95484 217 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 PRAMEF12O95522 483 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 RD3LP0DJH9 198 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 PRKAR2AP13861 404 aaKnown RBP7.17□□□□□ -1.26
HDAC9-214ENST00000441542 WARSP23381 471 aaKnown RBP7.17□□□□□ -1.26
HDAC9-214ENST00000441542 RPL9P32969 192 aaKnown RBP7.17□□□□□ -1.26
HDAC9-214ENST00000441542 ACLYP53396 1101 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 CRYBA2P53672 197 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 OAZ1P54368 228 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 ERVK-25P63136 954 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 GPR17Q13304 367 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 MELKQ14680 651 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 EIF4HQ15056 248 aaKnown RBP7.17□□□□□ -1.26
HDAC9-214ENST00000441542 CDKL4Q5MAI5 379 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 IER5LQ5T953 404 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 MICALL2Q8IY33 904 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 SAMD12Q8N8I0 201 aa7.17□□□□□ -1.26
HDAC9-214ENST00000441542 DNAJB8Q8NHS0 232 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms