RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PRELPP51888 382 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 MSLNQ13421 630 aaPredicted RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 PDE7AQ13946 482 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 P2RY14Q15391 338 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 TRADDQ15628 312 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 HIGD2BQ4VC39 106 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 MPPE1Q53F39 396 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 DDI2Q5TDH0 399 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 ITIH5Q86UX2 942 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF410Q86VK4 478 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 P2RY8Q86VZ1 359 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 PARP8Q8N3A8 854 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF713Q8N859 430 aaPredicted RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 SAMD12Q8N8I0 201 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 OR1K1Q8NGR3 316 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 SPAG8Q99932 426 aaPredicted RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 HSD17B14Q9BPX1 270 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 RPP25Q9BUL9 199 aaKnown RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 FUNDC2Q9BWH2 189 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 SLC26A1Q9H2B4 701 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 NT5DC2Q9H857 520 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 DDX28Q9NUL7 540 aaKnown RBP3.89□□□□□ -1.79
PFDN4-202ENST00000441080 FBXO7Q9Y3I1 522 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 MMP24Q9Y5R2 645 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 CPQQ9Y646 472 aa3.89□□□□□ -1.79
PFDN4-202ENST00000441080 PRDM1O75626 825 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 TXNDC12O95881 172 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 MT-ND1P03886 318 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 FOLR2P14207 255 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 PTGER3P43115 390 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 ALDH3B1P43353 468 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 HERV-K104P63124 156 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 GALK2Q01415 458 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 UBXN1Q04323 297 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 TMEM44Q2T9K0 475 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 AGAP7PQ5VUJ5 663 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 RTL6Q6ICC9 239 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 CDC20BQ86Y33 519 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 ZNRF1Q8ND25 227 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
PFDN4-202ENST00000441080 EEF2KMTQ96G04 330 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 C16orf58Q96GQ5 468 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 RPGRIP1Q96KN7 1286 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 FOXN4Q96NZ1 517 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 DPEP3Q9H4B8 488 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 SLC25A19Q9HC21 320 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 AKAP7Q9P0M2 348 aaPredicted RBP3.88□□□□□ -1.79
PFDN4-202ENST00000441080 EIF3KQ9UBQ5 218 aaKnown RBP3.88□□□□□ -1.79
PFDN4-202ENST00000441080 NARFQ9UHQ1 456 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 TSPAN16Q9UKR8 245 aa3.88□□□□□ -1.79
PFDN4-202ENST00000441080 DIMT1Q9UNQ2 313 aaKnown RBP3.88□□□□□ -1.79
PFDN4-202ENST00000441080 YJEFN3A6XGL0 299 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 MEI4A8MW99 385 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 SRRM5B3KS81 715 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 DDX39AO00148 427 aaKnown RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 SH3BGRLO75368 114 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 SEMA4FO95754 770 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 HPP00738 406 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 HCKP08631 526 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 SERPINF2P08697 491 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 MBL2P11226 248 aaPredicted RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 NSFP46459 744 aaKnown RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 LIMK2P53671 638 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 GFPT1Q06210 699 aaPredicted RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF506Q5JVG8 444 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 LEMD1Q68G75 181 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 LRRC49Q8IUZ0 686 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 CCDC71Q8IV32 467 aaPredicted RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 CNTN4Q8IWV2 1026 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 CHDHQ8NE62 594 aaPredicted RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 ACAT2Q9BWD1 397 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 TMEM245Q9H330 911 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 RPS10P5Q9NQ39 176 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 PIGVQ9NUD9 493 aa3.87□□□□□ -1.79
PFDN4-202ENST00000441080 MRPL11Q9Y3B7 192 aaKnown RBP3.87□□□□□ -1.79
PFDN4-202ENST00000441080 EEF2KO00418 725 aaKnown RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 PHF1O43189 567 aaPredicted RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 KERAO60938 352 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 RENP00797 406 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 P4HA1P13674 534 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 FOSL2P15408 326 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 AREGP15514 252 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 ZNF18P17022 549 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 GSTO1P78417 241 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 CDKL1Q00532 357 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 TSTA3Q13630 321 aaPredicted RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 EMC2Q15006 297 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 CCL14Q16627 93 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 HFEQ30201 348 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 EPC2Q52LR7 807 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 SLC10A5Q5PT55 438 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 ARMCX5Q6P1M9 558 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 ERC1Q8IUD2 1116 aa3.86□□□□□ -1.79
PFDN4-202ENST00000441080 RELL2Q8NC24 303 aaPredicted RBP3.86□□□□□ -1.79
PFDN4-202ENST00000441080 FBXO25Q8TCJ0 367 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms