RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SDC2P34741 201 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PPP3R1P63098 170 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 C1DQ13901 141 aaKnown RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 ARHGEF7Q14155 803 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 ELOAQ14241 798 aaKnown RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 DGKKQ5KSL6 1271 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 TMEM201Q5SNT2 666 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 PRPF38BQ5VTL8 546 aaKnown RBP11.34□□□□□ -0.59
LTBR-203ENST00000441074 LIPKQ5VXJ0 399 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 KLHL17Q6TDP4 642 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 LKAAEAR1Q8TD35 194 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 POF1BQ8WVV4 589 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 KCNN2Q9H2S1 579 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 SYNDIG1Q9H7V2 258 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 ACER3Q9NUN7 267 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 HCFC2Q9Y5Z7 792 aa11.34□□□□□ -0.59
LTBR-203ENST00000441074 C1orf226A1L170 272 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF25A6NGN4 478 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 PRAMEF1O95521 474 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 CKMP06732 381 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ZNF250P15622 560 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 OR1E2P47887 323 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ARF5P84085 180 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 CAMK1Q14012 370 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 SF3A2Q15428 464 aaKnown RBP11.33□□□□□ -0.6
LTBR-203ENST00000441074 ADGRF1Q5T601 910 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ANKRD54Q6NXT1 300 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 TMEM65Q6PI78 240 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 KREMEN2Q8NCW0 462 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 CLP1Q92989 425 aaKnown RBP11.33□□□□□ -0.6
LTBR-203ENST00000441074 IL4I1Q96RQ9 567 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 COPS8Q99627 209 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 PIP5K1AQ99755 562 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 PPIL3Q9H2H8 161 aaKnown RBP11.33□□□□□ -0.6
LTBR-203ENST00000441074 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 ING4Q9UNL4 249 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 RPL36Q9Y3U8 105 aaKnown RBP11.33□□□□□ -0.6
LTBR-203ENST00000441074 SNX11Q9Y5W9 270 aa11.33□□□□□ -0.6
LTBR-203ENST00000441074 TLR4O00206 839 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 FABP7O15540 132 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 GREM1O60565 184 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 OPN1SWP03999 348 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 ANXA5P08758 320 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CBSLP0DN79 551 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 LAMP1P11279 417 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CBSP35520 551 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 PPM1AP35813 382 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 C21orf58P58505 322 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 AP1S1P61966 158 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 NTHL1P78549 312 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 ARMC12Q5T9G4 340 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 RNF219Q5W0B1 726 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 C22orf42Q6IC83 251 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 MBOAT1Q6ZNC8 495 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 NAGSQ8N159 534 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 IL17RCQ8NAC3 791 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 AQP11Q8NBQ7 271 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 TMEM145Q8NBT3 493 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 PIH1D2Q8WWB5 315 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CREB3L1Q96BA8 519 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 MYO19Q96H55 970 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 KCTD7Q96MP8 289 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 NELL2Q99435 816 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 TMEM43Q9BTV4 400 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 EBPLQ9BY08 206 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 KLHL42Q9P2K6 505 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 LHX3Q9UBR4 397 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 BTNL2Q9UIR0 455 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CDH10Q9Y6N8 788 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 K7ERQ8 282 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 GRM6O15303 877 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 PLOD3O60568 738 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 GASTP01350 101 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 RAF1P04049 648 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 TPOP07202 933 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CA3P07451 260 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 CPEP16870 476 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 ACRV1P26436 265 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 XCR1P46094 333 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 SOX9P48436 509 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 STK19P49842 368 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 BTG1P62324 171 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 NFATC2Q13469 925 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 KCNC3Q14003 757 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 GPRC6AQ5T6X5 926 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 LRRC70Q7Z2Q7 622 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 GPALPP1Q8IXQ4 340 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 L3MBTL4Q8NA19 623 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms