RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DUX1O43812 170 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 JRKO75564 520 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GUCA1CO95843 209 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CST1P01037 141 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CATP04040 527 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PROS1P07225 676 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CTSBP07858 339 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MTHFD1P11586 935 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NCF1P14598 390 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FPR1P21462 350 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CDH3P22223 829 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ALAS2P22557 587 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CCR7P32248 378 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GRK3P35626 688 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 KIR3DL1P43629 444 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PHEXP78562 749 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GPR19Q15760 415 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 RPE65Q16518 533 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PHKG1Q16816 387 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 HKDC1Q2TB90 917 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TOR1AIP1Q5JTV8 583 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 C1orf189Q5VU69 101 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ARMC6Q6NXE6 501 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 UNC5DQ6UXZ4 953 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MBOAT1Q6ZNC8 495 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IKBIPQ70UQ0 350 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC80Q76M96 950 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 EIF3MQ7L2H7 374 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 R3HCC1LQ7Z5L2 792 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ANKRD13BQ86YJ7 626 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MSRB3Q8IXL7 192 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 AMER2Q8N7J2 671 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 OR56A3Q8NH54 315 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MAGEE2Q8TD90 523 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CYGBQ8WWM9 190 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SELENOMQ8WWX9 145 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 S100ZQ8WXG8 99 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 UBE2E3Q969T4 207 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FAM162AQ96A26 154 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SH3KBP1Q96B97 665 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 COQ8BQ96D53 544 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 LINC00615Q96LM1 132 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 APOL4Q9BPW4 351 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ACPTQ9BZG2 426 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 BHLHE41Q9C0J9 482 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SRMSQ9H3Y6 488 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IL1RL2Q9HB29 575 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IL1RAPQ9NPH3 570 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC177Q9NQR7 707 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NECTIN3Q9NQS3 549 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ARL15Q9NXU5 204 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SLC39A1Q9NY26 324 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF282Q9UDV7 671 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ATP6V1HQ9UI12 483 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TPRKBQ9Y3C4 175 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ASB1Q9Y576 335 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC88CQ9P219 2028 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 DIDO1Q9BTC0 2240 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 C17orf113A0A1B0GUU1 675 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RNASET2O00584 256 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SH3BGRLO75368 114 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PDYNP01213 254 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 EPORP19235 508 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CCNA2P20248 432 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DNAJA1P31689 397 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PCGF2P35227 344 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 HSD17B2P37059 387 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 HPCAL1P37235 193 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DCTP40126 519 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PRLHRP49683 370 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ARFIP1P53367 373 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ITGA1P56199 1179 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RPS18P62269 152 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 E2F1Q01094 437 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FOXK2Q01167 660 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FADDQ13158 208 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CAMK2BQ13554 666 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RAB39AQ14964 217 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 AGERQ15109 404 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 C6orf141Q5SZD1 244 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GTF2IRD2BQ6EKJ0 949 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 LRRC69Q6ZNQ3 347 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM26Q6ZUK4 368 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CBLL1Q75N03 491 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GTF2IRD2Q86UP8 949 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC22A15Q8IZD6 547 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CLEC4FQ8N1N0 589 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 WDR20Q8TBZ3 569 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TRUB1Q8WWH5 349 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ASB12Q8WXK4 309 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FGF11Q92914 225 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MUL1Q969V5 352 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 C12orf43Q96C57 262 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF347Q96SE7 839 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MACROD1Q9BQ69 325 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 EFCAB11Q9BUY7 163 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 THUMPD3Q9BV44 507 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ASPSCR1Q9BZE9 553 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms