RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 ZCCHC3Q9NUD5 404 aaKnown RBP11.13□□□□□ -0.63
SMAD3-202ENST00000439724 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 PCDHGA8Q9Y5G5 932 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 LYVE1Q9Y5Y7 322 aa11.13□□□□□ -0.63
SMAD3-202ENST00000439724 A0A0J9YVX5 310 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 TMEM247A6NEH6 219 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 METTL12A8MUP2 240 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 BCKDKO14874 412 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 SH3BP5O60239 455 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 MITFO75030 526 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 ERAL1O75616 437 aaKnown RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 MFN2O95140 757 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 TNFRSF1BP20333 461 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 CD247P20963 164 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 CD27P26842 260 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 ELK4P28324 431 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 XCR1P46094 333 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 LSSP48449 732 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 STARD6P59095 220 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 ISL1P61371 349 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 TNFRSF17Q02223 184 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 KCNC4Q03721 635 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 TOP3AQ13472 1001 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 RBM44Q6ZP01 1051 aaKnown RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 SETD9Q8NE22 299 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 CHDHQ8NE62 594 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 MIPOL1Q8TD10 442 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 APOBEC4Q8WW27 367 aaKnown RBP11.12□□□□□ -0.63
SMAD3-202ENST00000439724 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 RAB8BQ92930 207 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 C10orf90Q96M02 699 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF681Q96N22 645 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 LRRC61Q9BV99 259 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 OR51I1Q9H343 314 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 EXD2Q9NVH0 621 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 HRASLS2Q9NWW9 162 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 KIF17Q9P2E2 1029 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 P2RX2Q9UBL9 471 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 PSME2Q9UL46 239 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 SLCO1B1Q9Y6L6 691 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 ENPP4Q9Y6X5 453 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 HSPE1-MOB4S4R3N1 261 aa11.12□□□□□ -0.63
SMAD3-202ENST00000439724 KRBA1A5PL33 1030 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 OR5K3A6NET4 321 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 A8MVJ9 347 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 E9PQ18 207 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 RECKO95980 971 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 FHP07954 510 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 JUNDP17535 347 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 RHCEP18577 417 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF10P21506 573 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-202ENST00000439724 CRHBPP24387 322 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 MPIP34949 423 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 BUD31P41223 144 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-202ENST00000439724 OR1E2P47887 323 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 GABARAPL2P60520 117 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 HHEXQ03014 270 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 DUSP2Q05923 314 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 CD47Q08722 323 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 UBXN2BQ14CS0 331 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 MANEAQ5SRI9 462 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 C6orf141Q5SZD1 244 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ABHD13Q7L211 337 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF605Q86T29 641 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 IQCHQ86VS3 1027 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 OOSP2Q86WS3 158 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 SFTPA2Q8IWL1 248 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 SAMD14Q8IZD0 417 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-202ENST00000439724 GJD3Q8N144 294 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 AVL9Q8NBF6 648 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 CADM4Q8NFZ8 388 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 GIPC3Q8TF64 312 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ZDHHC1Q8WTX9 485 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 RASSF5Q8WWW0 418 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 SHDQ96IW2 340 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF607Q96SK3 696 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 NELL2Q99435 816 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 PITX2Q99697 317 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 PIP5K1AQ99755 562 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 PSD2Q9BQI7 771 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 GABARAPL3Q9BY60 117 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 KRT84Q9NSB2 600 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 KCMF1Q9P0J7 381 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 THEGQ9P2T0 379 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 WNT16Q9UBV4 365 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 TESMINQ9Y4I5 508 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 ZNF780BQ9Y6R6 833 aa11.11□□□□□ -0.63
SMAD3-202ENST00000439724 LOC105369274A0A096LPK9 316 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 LOC102723532A0A0G2JNH3 316 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 A0A1W2PR77 199 aa11.1□□□□□ -0.63
SMAD3-202ENST00000439724 H0YGG7 62 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms