RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GATBO75879 557 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ALAS2P22557 587 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZNF81P51508 661 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 CLDN8P56748 225 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TAS2R50P59544 299 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TARDBPQ13148 414 aaKnown RBP eCLIP9.47□□□□□ -0.898e-6■■■□□ 18.9
CDC42SE1-202ENST00000439374 EFR3AQ14156 821 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ARHGEF6Q15052 776 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 GPR68Q15743 365 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZXDCQ2QGD7 858 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 MACC1Q6ZN28 852 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 PDZD3Q86UT5 571 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 RNF130Q86XS8 419 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZZZ3Q8IYH5 903 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 DPP10Q8N608 796 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 PJA1Q8NG27 643 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 IRF7Q92985 503 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 NEIL2Q969S2 332 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ALG14Q96F25 216 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZSWIM3Q96MP5 696 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 BARHL1Q9BZE3 327 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 CLMPQ9H6B4 373 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 PSORS1C1Q9UIG5 152 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 GABRR3A8MPY1 467 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 KLK8O60259 260 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 MAT2AP31153 395 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 KIR2DL3P43628 341 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 RORCP51449 518 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 GAB1Q13480 694 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 LYPLAL1Q5VWZ2 237 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 BHLHB9Q6PI77 547 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 OR2A12Q8NGT7 310 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 FIBINQ8TAL6 211 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SMAP2Q8WU79 429 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 FATE1Q969F0 183 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SAMD11Q96NU1 681 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 KCNH6Q9H252 994 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TMEM245Q9H330 911 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 MKLN1Q9UL63 735 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TMCC3Q9ULS5 477 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 NDRG2Q9UN36 371 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 FEZF1A0PJY2 475 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ATG13O75143 517 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 KCNK5O95279 499 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 C8GP07360 202 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 RHOP08100 348 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRPS2P11908 318 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 EPCAMP16422 314 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 LAG3P18627 525 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 DDCP20711 480 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC9A3P48764 834 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TUBA1BP68363 451 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 BTN1A1Q13410 526 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 KRR1Q13601 381 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 DUOXA1Q1HG43 343 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 COQ5Q5HYK3 327 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 IDNKQ5T6J7 187 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SMARCD3Q6STE5 483 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC39A5Q6ZMH5 540 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TUBA1AQ71U36 451 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 IZUMO1Q8IYV9 350 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 RASGEF1AQ8N9B8 481 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 CEP76Q8TAP6 659 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 ASB11Q8WXH4 323 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 PPCDCQ96CD2 204 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 MKRN2Q9H000 416 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 SAP130Q9H0E3 1048 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 XKR8Q9H6D3 395 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 TRPS1Q9UHF7 1281 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 NDRG4Q9ULP0 352 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 POLHQ9Y253 713 aa9.47□□□□□ -0.89
CDC42SE1-202ENST00000439374 WASHC1A8K0Z3 465 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 PCCBP05166 539 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 CELP19835 753 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 PRPS1L1P21108 318 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 VEGFBP49765 207 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 AP2S1P53680 142 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 VSX2P58304 361 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 GRIK2Q13002 908 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 FGL2Q14314 439 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 SPHARQ15513 63 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZNF791Q3KP31 576 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 HIST2H2AA3Q6FI13 130 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 WASH2PQ6VEQ5 465 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 WDR48Q8TAF3 677 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 XAGE5Q8WWM1 108 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 SLC12A9Q9BXP2 914 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 SPRTNQ9H040 489 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 EQTNQ9NQ60 294 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 ZNF226Q9NYT6 803 aa9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 EIF3KQ9UBQ5 218 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-202ENST00000439374 CPSF4LA6NMK7 179 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 H7C0S8 307 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 ARNTLO00327 626 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SOCS5O75159 536 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 POP7O75817 140 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms