RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CAB39Q9Y376 341 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 HEATR5BQ9P2D3 2071 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 A0A1W2PRB8 838 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 M0QX08 132 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 LCKP06239 509 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 KRT20P35900 424 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC35A2P78381 396 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 MAD2L1BPQ15013 274 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 SYT16Q17RD7 645 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 COLEC12Q5KU26 742 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 GOT1L1Q8NHS2 421 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 ZBTB20Q9HC78 741 aaPredicted RBP13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 TAAR2Q9P1P5 351 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 LYVE1Q9Y5Y7 322 aa13.19□□□□□ -0.3
PTCHD3-201ENST00000438700 A0A1W2PPC1 479 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 LRRC72A6NJI9 287 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 J3KTA2 159 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TNFRSF11BO00300 401 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PLPP1O14494 284 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC22A1O15245 554 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 NDUFB5O43674 189 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PIK3CBP42338 1070 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 CDH12P55289 794 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SPIBQ01892 262 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 ARMC8Q8IUR7 673 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 LYSMD2Q8IV50 215 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 ANKRD53Q8N9V6 530 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 LGALS12Q96DT0 336 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 F2RL3Q96RI0 385 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 FERD3LQ96RJ6 166 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 FEVQ99581 238 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 EPYCQ99645 322 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 KLHL3Q9UH77 587 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PCDHGB3Q9Y5G1 929 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PRSS38A1L453 326 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PRAMEF25A6NGN4 478 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM20BO75063 409 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 ERGP11308 486 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SERPINB1P30740 379 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 CDK6Q00534 326 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 LRRC74AQ0VAA2 488 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TCEA2Q15560 299 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 MLF2Q15773 248 aaPredicted RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TPRG1LQ5T0D9 272 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 C10orf62Q5T681 223 aaPredicted RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 STEAP3Q658P3 488 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SPATC1Q76KD6 591 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC9B2Q86UD5 537 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TSPYL5Q86VY4 417 aaPredicted RBP13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 C17orf64Q86WR6 236 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 DENND6BQ8NEG7 585 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 RHOXF1Q8NHV9 184 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 PDXPQ96GD0 296 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 C1GALT1Q9NS00 363 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 TPRKBQ9Y3C4 175 aa13.18□□□□□ -0.3
PTCHD3-201ENST00000438700 ANKDD1BA6NHY2 528 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 FAM47E-STBD1D6RA91 191 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 H7BY64 318 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 DLGAP3O95886 979 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 VIPP01282 170 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 HNRNPA2B1P22626 353 aaKnown RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 SOWAHCQ53LP3 525 aaPredicted RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 THOC7Q6I9Y2 204 aaKnown RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 TRIM40Q6P9F5 258 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 LCTLQ6UWM7 567 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 SLC5A8Q8N695 610 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 POC5Q8NA72 575 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 SCARF2Q96GP6 870 aaPredicted RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 BMFQ96LC9 184 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 PRAP1Q96NZ9 151 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 HOXD1Q9GZZ0 328 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 TP63Q9H3D4 680 aaPredicted RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 RNF167Q9H6Y7 350 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 CA14Q9ULX7 337 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 PRR19A6NJB7 356 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 OR52A4PA6NMU1 304 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 ADAMDEC1O15204 470 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 WBP4O75554 376 aaKnown RBP13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 SEMA4FO95754 770 aa13.17□□□□□ -0.3
PTCHD3-201ENST00000438700 MAPK12P53778 367 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms