RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23■■□□□ 1.278e-8■□□□□ 9.9
RAPGEF1-206ENST00000438647 MKS1Q9NXB0 559 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 TEX10Q9NXF1 929 aaPredicted RBP23■■□□□ 1.27
RAPGEF1-206ENST00000438647 MYOTQ9UBF9 498 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 LGALS13Q9UHV8 139 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 COL12A1Q99715 3063 aa23■■□□□ 1.27
RAPGEF1-206ENST00000438647 NAGLUP54802 743 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 GALNT1Q10472 559 aaPredicted RBP22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 TBL3Q12788 808 aaKnown RBP22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 MAPKAPK3Q16644 382 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 TCHHL1Q5QJ38 904 aaPredicted RBP22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 NDUFAF5Q5TEU4 345 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 GALNTL5Q7Z4T8 443 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 GPALPP1Q8IXQ4 340 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 CYP4Z2PQ8N1L4 340 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 SENP5Q96HI0 755 aaPredicted RBP22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 FBXL20Q96IG2 436 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 APOPT1Q96IL0 206 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 HES7Q9BYE0 225 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 OXSMQ9NWU1 459 aa22.99■■□□□ 1.27
RAPGEF1-206ENST00000438647 SVILO95425 2214 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 PRKNO60260 465 aaPredicted RBP22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 TUBBP07437 444 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 SLC35E2P0CK97 266 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 PIK3R1P27986 724 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 GALNSP34059 522 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 RNF4P78317 190 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 SPRED3Q2MJR0 410 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 LIPMQ5VYY2 423 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 FRMD7Q6ZUT3 714 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 TRABD2AQ86V40 505 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 MREGQ8N565 214 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 C1orf52Q8N6N3 182 aaKnown RBP22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 ZNF721Q8TF20 911 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 PPWD1Q96BP3 646 aaKnown RBP22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 PARD6BQ9BYG5 372 aa22.98■■□□□ 1.27
RAPGEF1-206ENST00000438647 POLEQ07864 2286 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 C1orf226A1L170 272 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 ASPDHA6ND91 283 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 TMEM200CA6NKL6 621 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 A8MVJ9 347 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 NME2P1O60361 137 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 CRCPO75575 148 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 OR2J2O76002 312 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 NME2P22392 152 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 TDGF1P3P51864 188 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 TRA2BP62995 288 aaKnown RBP22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 PMP22Q01453 160 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 ZNF321PQ8N8H1 164 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 OR4K14Q8NGD5 310 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 ASB15Q8WXK1 588 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 RIT1Q92963 219 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 FAIM2Q9BWQ8 316 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 HPF1Q9NWY4 346 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 KLF13Q9Y2Y9 288 aaPredicted RBP22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 PLLPQ9Y342 182 aa22.97■■□□□ 1.27
RAPGEF1-206ENST00000438647 PGRMC2O15173 223 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 IGKV3-11P04433 115 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 HK2P52789 917 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 ASPHQ12797 758 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 SPIN4Q56A73 249 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 SRRM1Q8IYB3 904 aaKnown RBP22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 BANPQ8N9N5 519 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 NUBPLQ8TB37 319 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 CHTF18Q8WVB6 975 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 CNPPD1Q9BV87 410 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 ACPTQ9BZG2 426 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 C12orf65Q9H3J6 166 aaKnown RBP22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 MCM8Q9UJA3 840 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 PSME2Q9UL46 239 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 ERVK-11Q9UQG0 969 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 TIMM22Q9Y584 194 aa22.96■■□□□ 1.27
RAPGEF1-206ENST00000438647 SERTM1A2A2V5 107 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 WASHC1A8K0Z3 465 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 WWP2O00308 870 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 HTR6P50406 440 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 ERVK-8P63133 956 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 ACSM2AQ08AH3 577 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 C6orf163Q5TEZ5 329 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 ACSM2BQ68CK6 577 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZNF227Q86WZ6 799 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 FRMD6Q96NE9 622 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 KCNA7Q96RP8 456 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 RASL10BQ96S79 203 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 SMC6Q96SB8 1091 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 TMEM109Q9BVC6 243 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 LIN28AQ9H9Z2 209 aaKnown RBP22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 TIMMDC1Q9NPL8 285 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 RYDENQ9NUL5 291 aaKnown RBP22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 RAB21Q9UL25 225 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 ERVK-19Q9WJR5 959 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC5A6Q9Y289 635 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 DOPEY2Q9Y3R5 2298 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 PCDHA9Q9Y5H5 950 aa22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 USP9XQ93008 2570 aaPredicted RBP22.95■■□□□ 1.26
RAPGEF1-206ENST00000438647 HIVEP3Q5T1R4 2406 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 GOLGA6L10A6NI86 522 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 UBFD1O14562 309 aaKnown RBP22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 SEMA7AO75326 666 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 DEKP35659 375 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms