RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 DCLRE1BQ9H816 532 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SFXN1Q9H9B4 322 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CLK4Q9HAZ1 481 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NT5MQ9NPB1 228 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CHST11Q9NPF2 352 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPR173Q9NS66 373 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARL15Q9NXU5 204 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 GAR1Q9NY12 217 aaKnown RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RBAKQ9NYW8 714 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 FLRT1Q9NZU1 646 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADAM22Q9P0K1 906 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 STOX2Q9P2F5 926 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PSMC3IPQ9P2W1 217 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF639Q9UID6 485 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 SCML1Q9UN30 329 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 DHDHQ9UQ10 334 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 RASD1Q9Y272 281 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRRC42Q9Y546 428 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRP12Q9Y561 859 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 PCDHAC2Q9Y5I4 1007 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 USP16Q9Y5T5 823 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
HMGB1P12-201ENST00000438594 CUX2O14529 1486 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCDC195A0A1B0GUA6 201 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A1B0GUA9 196 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A1W2PRB8 838 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA8JA6NMD2 632 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSPB2A8KAH6 182 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 A8MXQ7 604 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 C9JVG2 144 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MCIDASD6RGH6 385 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 EEF2KO00418 725 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 NBR2O15453 112 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PMPCBO75439 489 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GMNNO75496 209 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DDNO94850 711 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR2F2O95006 317 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 FTH1P02794 183 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 STSP08842 583 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA8HP0CJ92 632 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PNMA6AP0CW24 399 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DBTP11182 482 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MLNP12872 115 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DARSP14868 501 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 AMD1P17707 334 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GSTM3P21266 225 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACKR3P25106 362 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PDHA2P29803 388 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GRIA3P42263 894 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 NDST2P52849 883 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 EMP2P54851 167 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDH6P55285 790 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 UBE2G2P60604 165 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 TUBA4AP68366 448 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDK3Q00526 305 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC18A2Q05940 514 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF844Q08AG5 666 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDH17Q12864 832 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC10A2Q12908 348 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 KEAP1Q14145 624 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MELKQ14680 651 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 HEPACAMQ14CZ8 416 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSPB2Q16082 182 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CAMK4Q16566 473 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ACKR1Q16570 336 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 AGKQ53H12 422 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 TTMPQ5BVD1 217 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CMPK2Q5EBM0 449 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 C20orf194Q5TEA3 1177 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM46CQ5VWP2 391 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SUSD4Q5VX71 490 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 LIPNQ5VXI9 398 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MFSD14CQ5VZR4 134 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 RUSC1-AS1Q66K80 236 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 THOC7Q6I9Y2 204 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 C11orf87Q6NUJ2 197 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 C1orf94Q6P1W5 598 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM171BQ6P995 826 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPPA4Q7L190 304 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PAGE2Q7Z2X7 111 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC22A16Q86VW1 577 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMPRSS12Q86WS5 348 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 RBM45Q8IUH3 476 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAP7D3Q8IWC1 876 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 LAS2Q8IYD9 372 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 THEM5Q8N1Q8 247 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM109AQ8N4B1 249 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAB21L3Q8N8X9 362 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNX31Q8N9S9 440 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GATSQ8NAP1 163 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MLKLQ8NB16 471 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 COLGALT1Q8NBJ5 622 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR10H4Q8NGA5 316 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MARCH1Q8TCQ1 289 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SEPT8Q92599 483 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 RPL3LQ92901 407 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RX5Q93086 422 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 RPL36ALQ969Q0 106 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms