RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ATXN3P54252 364 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ABCE1P61221 599 aaKnown RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCZ1BP86790 482 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCZ1P86791 482 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 MSLNQ13421 630 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ENPP2Q13822 863 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 SMC1AQ14683 1233 aaKnown RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZNF146Q15072 292 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 SLC1A5Q15758 541 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 RFTN2Q52LD8 501 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 GPAT3Q53EU6 434 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CT45A2Q5DJT8 189 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CMPK2Q5EBM0 449 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 NKAIN2Q5VXU1 208 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZNF343Q6P1L6 599 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ISLR2Q6UXK2 745 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 DLEU7Q6UYE1 221 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZNF730Q6ZMV8 503 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 GPRIN3Q6ZVF9 776 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 TAF8Q7Z7C8 310 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 WDR49Q8IV35 697 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 RASL10AQ92737 203 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ESAMQ96AP7 390 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 RPGRIP1Q96KN7 1286 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 TRIM6Q9C030 488 aaPredicted RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 WWP1Q9H0M0 922 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 C1orf21Q9H246 121 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 GANQ9H2C0 597 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 PLEKHA3Q9HB20 300 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 ACOXLQ9NUZ1 547 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 GTSE1Q9NYZ3 720 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 SPASTQ9UBP0 616 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 KCNN3Q9UGI6 736 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 DNPEPQ9ULA0 475 aa3□□□□□ -1.93
TRAPPC13-204ENST00000438419 PIN4Q9Y237 131 aaKnown RBP3□□□□□ -1.93
TRAPPC13-204ENST00000438419 FER1L5A0AVI2 2057 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 A0A1W2PPR1 153 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 SH3PXD2BA1X283 911 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 TMCO5BA8MYB1 307 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 CCSO14618 274 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 PRPSAP2O60256 369 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 CSO75390 466 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 B3GALNT1O75752 331 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 ANXA9O76027 345 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 SELEP16581 610 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 SHC1P29353 583 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 RPL9P32969 192 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 HSPA1LP34931 641 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 FHITP49789 147 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 PEX3P56589 373 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 NLRP11P59045 1033 aaKnown RBP2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 SRPXP78539 464 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 FCHO2Q0JRZ9 810 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 OR1C1Q15619 314 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 EPC2Q52LR7 807 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 MPPE1Q53F39 396 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 TOR1AIP1Q5JTV8 583 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 DCAF12Q5T6F0 453 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 RTL6Q6ICC9 239 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 HDDC3Q8N4P3 179 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 C17orf47Q8NEP4 570 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 OR6M1Q8NGM8 313 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 C8orf46Q8TAG6 207 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 LIPHQ8WWY8 451 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 RAB39BQ96DA2 213 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 FAM111AQ96PZ2 611 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 PSMB7Q99436 277 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 PYGO2Q9BRQ0 406 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 TRPV6Q9H1D0 765 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 SLC26A1Q9H2B4 701 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 CXXC4Q9H2H0 198 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 GDF3Q9NR23 364 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 UMODL1Q5DID0 1318 aa2.99□□□□□ -1.93
TRAPPC13-204ENST00000438419 A0A0U1RRA0 63 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 OR5H15A6NDH6 313 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 YJEFN3A6XGL0 299 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 KIAA0513O60268 411 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 TXNDC12O95881 172 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 TGFAP01135 160 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 IGHV3-13P01766 116 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 PGK2P07205 417 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 PROS1P07225 676 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 GHRP10912 638 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 GATA1P15976 413 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 PTMSP20962 102 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 ZNF10P21506 573 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 GLRA1P23415 457 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 AKT2P31751 481 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 ID1P41134 155 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 TNFRSF4P43489 277 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 LIMK2P53671 638 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 MFGE8Q08431 387 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 RBBP4Q09028 425 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 BTG3Q14201 252 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 GAMTQ14353 236 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 MEF2DQ14814 521 aa2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 EXOSC7Q15024 291 aaKnown RBP2.98□□□□□ -1.93
TRAPPC13-204ENST00000438419 KARSQ15046 597 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 242.3 ms