RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ST6GALNAC4Q9H4F1 302 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CXorf21Q9HAI6 301 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SPHK2Q9NRA0 654 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 AGLP35573 1532 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 E9PCH4 1651 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC1A7O00341 560 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC19A2O60779 497 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 RP2O75695 350 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 IDH3AP50213 366 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TUBA1BP68363 451 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TUBA4AP68366 448 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ARL16Q0P5N6 197 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PPA1Q15181 289 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TUBA1AQ71U36 451 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PIGWQ7Z7B1 504 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ZDHHC1Q8WTX9 485 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLC25A44Q96H78 314 aaPredicted RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 VRK1Q99986 396 aaPredicted RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF559Q9BR84 538 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ARHGAP39Q9C0H5 1083 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 EIF5A2Q9GZV4 153 aaKnown RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 FAIMQ9NVQ4 179 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 AQP12BA6NM10 295 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 NPPAP01160 153 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 KCNC4Q03721 635 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SLAMF1Q13291 335 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 GAS6Q14393 721 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF169Q14929 603 aaPredicted RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 MS4A13Q5J8X5 152 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 LYSMD4Q5XG99 296 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 USP53Q70EK8 1073 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 AQP12AQ8IXF9 295 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 TSPEARQ8WU66 669 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 OR5P2Q8WZ92 322 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 FKBP10Q96AY3 582 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CDK15Q96Q40 435 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 SSU72Q9NP77 194 aaKnown RBP10.75□□□□□ -0.69
SCN4A-201ENST00000435607 CITO14578 2027 aa10.75□□□□□ -0.69
SCN4A-201ENST00000435607 PRSS51A0A1B0GVH4 220 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 LRRC10BA6NIK2 292 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 HEPACAM2A8MVW5 462 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 LRRTM2O43300 516 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ZNF821O75541 412 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GSRP00390 522 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 AKR1C4P17516 323 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ASPAP45381 313 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GPR17Q13304 367 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GPR157Q5UAW9 335 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CLEC20AQ6ZU45 233 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GALNT12Q8IXK2 581 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GATSQ8NAP1 163 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SGCZQ96LD1 299 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 REEP4Q9H6H4 257 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 UCKL1Q9NWZ5 548 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 DLGAP4Q9Y2H0 992 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 REXO2Q9Y3B8 237 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 FAM149AA5PLN7 773 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 POLR1CO15160 346 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 MMP2P08253 660 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 GNB3P16520 340 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 HHEXQ03014 270 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 DAG1Q14118 895 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 EXOC3L2Q2M3D2 409 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 BTBD16Q32M84 506 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CDNFQ49AH0 187 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 OGFOD2Q6N063 350 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 IRF2BP2Q7Z5L9 587 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 OR6C4Q8NGE1 309 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ATOH1Q92858 354 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 FAM46BQ96A09 425 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 C1orf226A1L170 272 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 M0QX08 132 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 EDNRBP24530 442 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CDK3Q00526 305 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 HMGCS1Q01581 520 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SPATS1Q496A3 300 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 TMEM203Q969S6 136 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SULT4A1Q9BR01 284 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 NANSQ9NR45 359 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 COL5A2P05997 1499 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 A0A1W2PQU0 124 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 J3QRK9 145 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 PRKD3O94806 890 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 HAPLN1P10915 354 aaPredicted RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 ART1P52961 327 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SNU13P55769 128 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CNEP1R1Q8N9A8 125 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 RBM15BQ8NDT2 890 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 NAT6Q93015 286 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SPIN2AQ99865 258 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SPIN2BQ9BPZ2 258 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CRB3Q9BUF7 120 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CPEB1Q9BZB8 566 aaKnown RBP10.74□□□□□ -0.69
SCN4A-201ENST00000435607 NMUR2Q9GZQ4 415 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 SACM1LQ9NTJ5 587 aa10.74□□□□□ -0.69
SCN4A-201ENST00000435607 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms