RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 DLGAP3O95886 979 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SLC16A8O95907 504 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 STSP08842 583 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 OSMP13725 252 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ENDOUP21128 410 aaKnown RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 S100A1P23297 94 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CXCR2P25025 360 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CSTF2P33240 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SLC15A1P46059 708 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 BDKRB1P46663 353 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PCYT1AP49585 367 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 DSTNP60981 165 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SEMG2Q02383 582 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 UBE3AQ05086 875 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CNTN1Q12860 1018 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ILKQ13418 452 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SLBPQ14493 270 aaKnown RBP eCLIP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PTGES3Q15185 160 aaKnown RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 NDUFA9Q16795 377 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ARHGAP15Q53QZ3 475 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TMEM201Q5SNT2 666 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CATSPEREQ5SY80 951 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 DEPDC1Q5TB30 811 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SLX4IPQ5VYV7 408 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 FRMPD2BQ6IN97 320 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TMEM220Q6QAJ8 160 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 Q6ZVL8 140 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 Q6ZVU0 165 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PTCHD4Q6ZW05 846 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TMPRSS11BQ86T26 416 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CCDC190Q86UF4 302 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 RNF130Q86XS8 419 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CCDC103Q8IW40 242 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SYTL1Q8IYJ3 562 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TAGAPQ8N103 731 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 RNF175Q8N4F7 328 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PARP16Q8N5Y8 322 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 B3GNT7Q8NFL0 401 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 WFIKKN2Q8TEU8 576 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ZNF480Q8WV37 535 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 IRF7Q92985 503 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SCAMP4Q969E2 229 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 MAL2Q969L2 176 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 NEIL2Q969S2 332 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 TMCO6Q96DC7 493 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PDXPQ96GD0 296 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 LINC00615Q96LM1 132 aaPredicted RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 FAM129BQ96TA1 746 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 MGLLQ99685 303 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 CTRCQ99895 268 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 MYOCQ99972 504 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 RHNO1Q9BSD3 238 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 UCK2Q9BZX2 261 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 NUAK2Q9H093 628 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 DPEP2Q9H4A9 486 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SYNDIG1Q9H7V2 258 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ZBTB20Q9HC78 741 aaPredicted RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 FZD3Q9NPG1 666 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ZSCAN32Q9NX65 697 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 GPR83Q9NYM4 423 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 MARK1Q9P0L2 795 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 FTSJ1Q9UET6 329 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 IL36AQ9UHA7 158 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 SLCO3A1Q9UIG8 710 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 EXO1Q9UQ84 846 aaKnown RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 RPL36Q9Y3U8 105 aaKnown RBP8.28□□□□□ -1.08
GABPB1-205ENST00000429662 PCDHGB6Q9Y5F9 930 aa8.28□□□□□ -1.08
GABPB1-205ENST00000429662 ANAPC1Q9H1A4 1944 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 DSPPQ9NZW4 1301 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 CYSRT1A8MQ03 144 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SLC9A3R1O14745 358 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 TBX1O43435 398 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NARSO43776 548 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 DYRK3O43781 588 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 MTX2O75431 263 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 LEFTY1O75610 366 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 DXOO77932 396 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SLITRK5O94991 958 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SCG5P05408 212 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ELFN1P0C7U0 828 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 CTSAP10619 480 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 NPPBP16860 134 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 PTPN2P17706 415 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 AQP1P29972 269 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 HOXD12P35452 270 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ETV3P41162 512 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 GSSP48637 474 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ANXA11P50995 505 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 TBPL1P62380 186 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ALDH6A1Q02252 535 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 COX10Q12887 443 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 C1DQ13901 141 aaKnown RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 OCLNQ16625 522 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF658BQ4V348 819 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-205ENST00000429662 ZNF385BQ569K4 471 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 PRSS36Q5K4E3 855 aa8.27□□□□□ -1.09
GABPB1-205ENST00000429662 SLC25A30Q5SVS4 291 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms