RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MAP7Q14244 749 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NSDHLQ15738 373 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NKG7Q16617 165 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRSS53Q2L4Q9 553 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 MPEG1Q2M385 716 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPDYE7PQ495Y7 208 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 C6orf163Q5TEZ5 329 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 REP15Q6BDI9 236 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAAH2Q6GMR7 532 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 QSOX2Q6ZRP7 698 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 MSANTD1Q6ZTZ1 278 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCDC121Q6ZUS5 278 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ERMP1Q7Z2K6 904 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ZNF551Q7Z340 670 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TIPARPQ7Z3E1 657 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SZRD1Q7Z422 152 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CLECL1Q8IZS7 167 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NATD1Q8N6N6 113 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ENDOVQ8N8Q3 282 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PCYOX1LQ8NBM8 494 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR8J2Q8NGG1 315 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR4A15Q8NGL6 344 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR9A2Q8NGT5 310 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 RP9Q8TA86 221 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TSPEARQ8WU66 669 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 METTL21AQ8WXB1 218 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TSLPQ969D9 159 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 KIAA1143Q96AT1 154 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANKRD9Q96BM1 317 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NSL1Q96IY1 281 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 AMDHD1Q96NU7 426 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PANX1Q96RD7 426 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SPSB2Q99619 263 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SCNM1Q9BWG6 230 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TGIF2Q9GZN2 237 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 VN1R1Q9GZP7 353 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SLC26A1Q9H2B4 701 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 AKIRIN1Q9H9L7 192 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 IL1RL2Q9HB29 575 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 ASCL3Q9NQ33 180 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SEMA3GQ9NS98 782 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 TAS2R7Q9NYW3 318 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 LEF1Q9UJU2 399 aaPredicted RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 C3orf18Q9UK00 162 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CROTQ9UKG9 612 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 CES1P1Q9UKY3 287 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PCDHGB4Q9UN71 923 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PTRH2Q9Y3E5 179 aaKnown RBP7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 SNX8Q9Y5X2 465 aa7.43□□□□□ -1.22
HMGA1P4-201ENST00000428643 PCM1Q15154 2024 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 HEATR5BQ9P2D3 2071 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 PRSS51A0A1B0GVH4 220 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 TRABD2BA6NFA1 517 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 ERICH4A6NGS2 130 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 VSTM2BA6NLU5 285 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 MYO1GB0I1T2 1018 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 C21orf140B9A014 251 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 RNASET2O00584 256 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 FBP2O00757 339 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 RRP9O43818 475 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 KCNH1O95259 989 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 ANP32DO95626 131 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 PORP16435 677 aaPredicted RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 TNNI3P19429 210 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 CALB2P22676 271 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 MPIP34949 423 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 DLSTP36957 453 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 CDK9P50750 372 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 EMP2P54851 167 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 MANFP55145 182 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 WNT3P56703 355 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 RPS15P62841 145 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 PHC1P78364 1004 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 DUSP2Q05923 314 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 LRRC74AQ0VAA2 488 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 GAB1Q13480 694 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 ART3Q13508 389 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 CAMK2BQ13554 666 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 DNASE1L3Q13609 305 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 SERTAD2Q14140 314 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 RTP5Q14D33 572 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 TLR1Q15399 786 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 LTB4RQ15722 352 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 TRMT5Q32P41 509 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 COQ5Q5HYK3 327 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 FAM69BQ5VUD6 431 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 DHDDSQ86SQ9 333 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 LAPTM4BQ86VI4 370 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 GALNT12Q8IXK2 581 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 IL22RA1Q8N6P7 574 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 OR5P2Q8WZ92 322 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 CCDC115Q96NT0 180 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 DGAT2Q96PD7 388 aa7.42□□□□□ -1.22
HMGA1P4-201ENST00000428643 PELOQ9BRX2 385 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms