RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DECR1Q16698 335 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF773Q6PK81 442 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 BLOC1S3Q6QNY0 202 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 GOLGA7Q7Z5G4 137 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TICAM1Q8IUC6 712 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PEX5LQ8IYB4 626 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ANKFN1Q8N957 763 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DIO2Q92813 273 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 CHCHD6Q9BRQ6 235 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SAMD4AQ9UPU9 718 aaKnown RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DLGAP4Q9Y2H0 992 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 RNF11Q9Y3C5 154 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PLEKHM1Q9Y4G2 1056 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 WDR90Q96KV7 1748 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 WASH4PA8MWX3 477 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 RGS10O43665 173 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 NUAK1O60285 661 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 F10P00742 488 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 P04436 131 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 IL6P05231 212 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 CD1EP15812 388 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PAICSP22234 425 aaKnown RBP10.16□□□□□ -0.78
TCOF1-204ENST00000427724 XKP51811 444 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TAS2R41P59536 307 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SHC2P98077 582 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 MC1RQ01726 317 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZP2Q05996 745 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 TRIQKQ629K1 86 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 CCDC116Q8IYX3 515 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 DPP10Q8N608 796 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 PIK3C3Q8NEB9 887 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ABHD11Q8NFV4 315 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 OR4K14Q8NGD5 310 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 KAT2AQ92830 837 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SLC35G5Q96KT7 338 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF597Q96LX8 424 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 MACROD1Q9BQ69 325 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 B4GALT7Q9UBV7 327 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 SPATA2Q9UM82 520 aa10.16□□□□□ -0.78
TCOF1-204ENST00000427724 INTS1Q8N201 2190 aaKnown RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ATRXP46100 2492 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 PATE3B3GLJ2 98 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 YY2O15391 372 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 AIREO43918 545 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 TMCC2O75069 709 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ZDHHC11BP0C7U3 371 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 PRDX3P30048 256 aaKnown RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ALDH3A2P51648 485 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 TYSND1Q2T9J0 566 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 C14orf28Q4W4Y0 310 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 PAGE3Q5JUK9 113 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 UBE2UQ5VVX9 321 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 RTL4Q6ZR62 310 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 KBTBD8Q8NFY9 601 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 OR5AK3PQ8NH89 298 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 WDR36Q8NI36 951 aaKnown RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 SLC37A2Q8TED4 501 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF354BQ96LW1 612 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 TWSG1Q9GZX9 223 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 NEUROD4Q9HD90 331 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 KCND3Q9UK17 655 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 POU2F3Q9UKI9 436 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 CNOT11Q9UKZ1 510 aaKnown RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 NSG1A0A0A6YYJ2 146 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ACOT7O00154 380 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 PLOD2O00469 737 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 SCO2O43819 266 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 PDE9AO76083 593 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 IL33O95760 270 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 C8BP07358 591 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 BMP2P12643 396 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ATF4P18848 351 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 MMP12P39900 470 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 ERV3-1Q14264 604 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 RNF111Q6ZNA4 994 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 GALNT10Q86SR1 603 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 GALNT12Q8IXK2 581 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 GATSQ8NAP1 163 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 OR8K5Q8NH50 307 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 KCNN1Q92952 543 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 KCNN2Q9H2S1 579 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 POT1Q9NUX5 634 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM181Q9P2C4 612 aa10.15□□□□□ -0.78
TCOF1-204ENST00000427724 DHCR7Q9UBM7 475 aaKnown RBP10.15□□□□□ -0.78
TCOF1-204ENST00000427724 A0A0J9YY10 115 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 SAGE2PA6NJ88 616 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 A8MVJ9 347 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 SCDO00767 359 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 C1QAP02745 245 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 ALDOCP09972 364 aaKnown RBP10.15□□□□□ -0.79
TCOF1-204ENST00000427724 PRPS2P11908 318 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 RPS15AP62244 130 aaKnown RBP10.15□□□□□ -0.79
TCOF1-204ENST00000427724 RPA4Q13156 261 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 SP140Q13342 867 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 OR4F3Q6IEY1 312 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF544Q6NX49 715 aa10.15□□□□□ -0.79
TCOF1-204ENST00000427724 LARP4Q71RC2 724 aaKnown RBP eCLIP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms