RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 ZAR1LA6NP61 321 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 ALPPP05187 535 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CD8BP10966 210 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 IDSP22304 550 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 GSTM5P46439 218 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 XKP51811 444 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 RAE1P78406 368 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 MAP4K2Q12851 820 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 PIN1Q13526 163 aaPredicted RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 C1DQ13901 141 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 FCN2Q15485 313 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 TECPR1Q7Z6L1 1165 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CDH24Q86UP0 819 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 LAS2Q8IYD9 372 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 LRR1Q96L50 414 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 POLR2J3Q9H1A7 115 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 KCNN3Q9UGI6 736 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 LSM2Q9Y333 95 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 HEPACAM2A8MVW5 462 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 H7C0S8 307 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 AKAP8O43823 692 aaKnown RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 FZD6O60353 706 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 SEMA7AO75326 666 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PAHP00439 452 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 BCHEP06276 602 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MYL12AP19105 171 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PCGF2P35227 344 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 BDKRB1P46663 353 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 AGFG1P52594 562 aaKnown RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MVDP53602 400 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PFN3P60673 137 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PRSS53Q2L4Q9 553 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MLIPQ5VWP3 458 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 C19orf48Q6RUI8 117 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 TMPRSS11BQ86T26 416 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MRPS31Q92665 395 aaKnown RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 KLF16Q9BXK1 252 aaPredicted RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 CHST8Q9H2A9 424 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 ANKRA2Q9H9E1 313 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 POLHQ9Y253 713 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 SLC9A8Q9Y2E8 581 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 LOC105369274A0A096LPK9 316 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 INMT-MINDY4F8WBC2 141 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 H7C4K7 107 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 CA12O43570 354 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 LANCL1O43813 399 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 IFNW1P05000 195 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 USP45Q70EL2 814 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 OR4N4Q8N0Y3 316 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 OR8J2Q8NGG1 315 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 RSPO3Q9BXY4 272 aaPredicted RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MVB12BQ9H7P6 319 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 KCTD5Q9NXV2 234 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 CHD7Q9P2D1 2997 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 MGAT4AQ9UM21 535 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 EXO1Q9UQ84 846 aaKnown RBP12.82□□□□□ -0.36
LRCH3-203ENST00000425562 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
LRCH3-203ENST00000425562 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 CD70P32970 193 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 PTGS2P35354 604 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 ALDH9A1P49189 494 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 SRP9P49458 86 aaKnown RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 FABP5Q01469 135 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 C2orf80Q0P641 193 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 ESCO2Q56NI9 601 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.81□□□□□ -0.368e-7■■■■□ 21.3
LRCH3-203ENST00000425562 LAPTM4BQ86VI4 370 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 PLD4Q96BZ4 506 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 KCTD7Q96MP8 289 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 NRTNQ99748 197 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 ZNF334Q9HCZ1 680 aaPredicted RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 GLTPQ9NZD2 209 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 SHISA3A0PJX4 238 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 ANKDD1BA6NHY2 528 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 E9PQ18 207 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 NRG2O14511 850 aaPredicted RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 XCR1P46094 333 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 HEPACAMQ14CZ8 416 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 C16orf62Q7Z3J2 963 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 DNAJB7Q7Z6W7 309 aaPredicted RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 THOC6Q86W42 341 aaKnown RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 ACAT2Q9BWD1 397 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 NDUFB11Q9NX14 153 aa12.81□□□□□ -0.36
LRCH3-203ENST00000425562 RUVBL1Q9Y265 456 aaKnown RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 NME6O75414 186 aaPredicted RBP12.81□□□□□ -0.36
LRCH3-203ENST00000425562 OR7A10O76100 309 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms