RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 NUDT13Q86X67 352 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 CHERPQ8IWX8 916 aaKnown RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 MCEMP1Q8IX19 187 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 IFT20Q8IY31 132 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 EID3Q8N140 333 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 ZFP62Q8NB50 900 aaPredicted RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 OR2M7Q8NG81 312 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 OR4F6Q8NGB9 312 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 OR8K3Q8NH51 312 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 KIF18AQ8NI77 898 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 FAM57AQ8TBR7 257 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 WDR20Q8TBZ3 569 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 DCAKDQ8WVC6 231 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 RIT1Q92963 219 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 ART5Q96L15 291 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 GAL3ST4Q96RP7 486 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 MRPL57Q9BQC6 102 aaKnown RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 FAM173AQ9BQD7 235 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 ERVK-6Q9BXR3 956 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 FUT8Q9BYC5 575 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 ELOVL6Q9H5J4 265 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 DDX31Q9H8H2 851 aaKnown RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 CHST11Q9NPF2 352 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 SACM1LQ9NTJ5 587 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.6□□□□□ -1.03
NUP50-206ENST00000422489 PSD3Q9NYI0 1048 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 AHSPQ9NZD4 102 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 COQ3Q9NZJ6 369 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 PCTPQ9UKL6 214 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 ERVK-19Q9WJR5 959 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 TSC22D4Q9Y3Q8 395 aa8.6□□□□□ -1.03
NUP50-206ENST00000422489 KLF2Q9Y5W3 355 aaPredicted RBP8.6□□□□□ -1.03
NUP50-206ENST00000422489 A0A0A6YYD5 115 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 A0A0G2JMM0 328 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ATP6AP2A0A1C7CYW4 349 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 A0A1W2PPB8 328 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 A0A1W2PRS3 328 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 KIR3DP1A8MWS1 328 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 NPIPA2E9PIF3 369 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 E9PLN8 166 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 NPIPA3F8WFD2 350 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 STX16-NPEPL1H3BU86 382 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ACOT7O00154 380 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 PPP6CO00743 305 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 STX16O14662 325 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ATP6AP2O75787 350 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 RHOXF2BP0C7M4 288 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 NR2F6P10588 404 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 TAC1P20366 129 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 NT5EP21589 574 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 PIK3R1P27986 724 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ECHS1P30084 290 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 DEKP35659 375 aaKnown RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 PIGAP37287 484 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 MAGEA12P43365 314 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 DNASE1L1P49184 302 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 XKP51811 444 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ARFIP1P53367 373 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 IGLV3-21P80748 117 aaPredicted RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 MPEG1Q2M385 716 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SLC22A10Q63ZE4 541 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 FRG2Q64ET8 278 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 TMEM211Q6ICI0 200 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 MRM1Q6IN84 353 aaKnown RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 ARHGAP11AQ6P4F7 1023 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 RNF111Q6ZNA4 994 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 GK5Q6ZS86 529 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SLC29A4Q7RTT9 530 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 CD163Q86VB7 1156 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SLC22A16Q86VW1 577 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 C9orf40Q8IXQ3 194 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ST13P4Q8IZP2 240 aaPredicted RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 FAM13CQ8NE31 585 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 OR4K14Q8NGD5 310 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 OR5M9Q8NGP3 310 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SLC22A8Q8TCC7 542 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 CA5BP1Q8WTZ4 195 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SELENOMQ8WWX9 145 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SDCCAG3Q96C92 435 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SGCZQ96LD1 299 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 FRG2BQ96QU4 278 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 VKORC1Q9BQB6 163 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 RHOXF2Q9BQY4 288 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 PELOQ9BRX2 385 aaKnown RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 NTMT1Q9BV86 223 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 MRPL1Q9BYD6 325 aaKnown RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 LDAHQ9H6V9 325 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 EXO5Q9H790 373 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 IL1RL2Q9HB29 575 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ZBTB26Q9HCK0 441 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 ALKBH4Q9NXW9 302 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 TUBA8Q9NY65 449 aaPredicted RBP8.59□□□□□ -1.03
NUP50-206ENST00000422489 ZNF180Q9UJW8 692 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 SLC12A4Q9UP95 1085 aa8.59□□□□□ -1.03
NUP50-206ENST00000422489 HRH3Q9Y5N1 445 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms