RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 FRKP42685 505 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 PDX1P52945 283 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 LIMK1P53667 647 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 MC2RQ01718 297 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 FOLH1Q04609 750 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 STX4Q12846 297 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 SYT16Q17RD7 645 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 PRSS53Q2L4Q9 553 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 RHBDD2Q6NTF9 364 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 CEACAM20Q6UY09 585 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 ZNF551Q7Z340 670 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 IFNEQ86WN2 208 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 TNIP2Q8NFZ5 429 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 GOT1L1Q8NHS2 421 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 FAM120BQ96EK7 910 aaKnown RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 CNRIP1Q96F85 164 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 AURKBQ96GD4 344 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 AMDHD1Q96NU7 426 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 CPPED1Q9BRF8 314 aaPredicted RBP16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 GLIPR2Q9H4G4 154 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 ALG2Q9H553 416 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 PRTFDC1Q9NRG1 225 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 CMTM6Q9NX76 183 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 SLC39A1Q9NY26 324 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 SLC25A37Q9NYZ2 338 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 SLC7A8Q9UHI5 535 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 LOXL2Q9Y4K0 774 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 PCDHB3Q9Y5E6 796 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 CEP250Q9BV73 2442 aa16.12■□□□□ 0.17
CCDC28B-202ENST00000421922 FRYLO94915 3013 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 TRBV5-3A0A0A0MS03 114 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MYO1GB0I1T2 1018 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 FAM227AF5H4B4 570 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 OR10H2O60403 315 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 LDB3O75112 727 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CPNE3O75131 537 aaKnown RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CSO75390 466 aaKnown RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GMNNO75496 209 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GPR75O95800 540 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MT-CO3P00414 261 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 FHP07954 510 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 FGF5P12034 268 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CPMP14384 443 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 PORP16435 677 aaPredicted RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 IL10P22301 178 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GCGRP47871 477 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 RAB15P59190 212 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 LIPEQ05469 1076 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CEACAM7Q14002 265 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 PWWP2BQ6NUJ5 590 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 BHLHB9Q6PI77 547 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 NET1Q7Z628 596 aaPredicted RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GLRX5Q86SX6 157 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 OR4N5Q8IXE1 308 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MSRB3Q8IXL7 192 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CCDC116Q8IYX3 515 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 FAM13CQ8NE31 585 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MOAP1Q96BY2 351 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 PHF12Q96QT6 1004 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 OR1F2PQ96R84 312 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CTRCQ99895 268 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 TRIM8Q9BZR9 551 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 TPT1P8Q9HAU6 139 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 C3orf14Q9HBI5 128 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 SLAMF7Q9NQ25 335 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 FBXO8Q9NRD0 319 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 SLC6A13Q9NSD5 602 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 SUCOQ9UBS9 1254 aaKnown RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 WASHC1A8K0Z3 465 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 B4E171 279 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GSTA4O15217 222 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CDC123O75794 336 aaPredicted RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 NTRK1P04629 796 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 JMJD7P0C870 316 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 HSD17B1P14061 328 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 TSPAN7P41732 249 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 ID2Q02363 134 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 ABHD18Q0P651 414 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 BNIP2Q12982 314 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 GAB1Q13480 694 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MAP7Q14244 749 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 CYP51A1Q16850 503 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 ISXQ2M1V0 245 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 HES3Q5TGS1 186 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 PGM2L1Q6PCE3 622 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 DHRS13Q6UX07 377 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 OR5AK3PQ8NH89 298 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 TRIM15Q9C019 465 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 APMAPQ9HDC9 416 aa16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 MKKSQ9NPJ1 570 aaPredicted RBP16.11■□□□□ 0.17
CCDC28B-202ENST00000421922 NUP210LQ5VU65 1888 aa16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 COL27A1Q8IZC6 1860 aaPredicted RBP16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 PRORSD1PA6NEY8 169 aa16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 FGF17O60258 216 aa16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 CTNSO60931 367 aa16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 AGXTP21549 392 aa16.1■□□□□ 0.17
CCDC28B-202ENST00000421922 NT5EP21589 574 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms