RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MS4A12Q9NXJ0 267 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 PHF11Q9UIL8 331 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ANGPTL3Q9Y5C1 460 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 TNPO3Q9Y5L0 923 aaKnown RBP10.22□□□□□ -0.77
SSBP3-206ENST00000420121 SPACA6W5XKT8 324 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 ARHGAP21Q5T5U3 1957 aa10.22□□□□□ -0.77
SSBP3-206ENST00000420121 A0A1B0GTH9 108 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TRIM49D1C9J1S8 452 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 C19orf84I3L1E1 186 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 PPP6CO00743 305 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TFECO14948 347 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 GLSO94925 669 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 CLDN9O95484 217 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 AIFM1O95831 613 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 INHBAP08476 426 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 RPS17P08708 135 aaKnown RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 RBP1P09455 135 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 CCL3P10147 92 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 COL6A2P12110 1019 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ABOP16442 354 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TNNI3P19429 210 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 HTR1EP28566 365 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 SERPINB9P50453 376 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 RAP1GDS1P52306 607 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 FOXO1Q12778 655 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 SPRED3Q2MJR0 410 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF791Q3KP31 576 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 GLE1Q53GS7 698 aaKnown RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 PIGGQ5H8A4 983 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 XKRXQ6PP77 449 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 CEP128Q6ZU80 1094 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ST13P4Q8IZP2 240 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 MARVELD2Q8N4S9 558 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 NUBPLQ8TB37 319 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 FAM57AQ8TBR7 257 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 PHF10Q8WUB8 498 aaKnown RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TANKQ92844 425 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 FBXL20Q96IG2 436 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 DGAT2Q96PD7 388 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TSPYL1Q9H0U9 437 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ZDHHC11Q9H8X9 412 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 SH2D2AQ9NP31 389 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 LYARQ9NX58 379 aaKnown RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 TEX10Q9NXF1 929 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ZNF225Q9UK10 706 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 ERVK-11Q9UQG0 969 aa10.21□□□□□ -0.77
SSBP3-206ENST00000420121 GLOD5A6NK44 160 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 A8MT66 165 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 E9PLN8 166 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 POC1B-GALNT4F8VUJ3 575 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 G3V3Y1 287 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 PGRMC2O15173 223 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 POLQO75417 2590 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 SEMA3DO95025 777 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 GPR75O95800 540 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 GBAP04062 536 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 FAM58BPP0C7Q3 252 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 CTAGE8P0CG41 777 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 NR2F6P10588 404 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-206ENST00000420121 ALOX15P16050 662 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-206ENST00000420121 PTGS2P35354 604 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 CASP6P55212 293 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 SLC37A1P57057 533 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 PLIN5Q00G26 463 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 ASPHQ12797 758 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 BIKQ13323 160 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 GGTA1PQ4G0N0 100 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 RTL4Q6ZR62 310 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 NUDT13Q86X67 352 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 CTAGE4Q8IX94 777 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 RPRMLQ8N4K4 120 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 GOLM1Q8NBJ4 401 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 ACBD4Q8NC06 268 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 MNS1Q8NEH6 495 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 OR4F6Q8NGB9 312 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 OR5L2Q8NGL0 311 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 ZNF483Q8TF39 744 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-206ENST00000420121 REPS1Q96D71 796 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 MTFMTQ96DP5 389 aaKnown RBP10.2□□□□□ -0.78
SSBP3-206ENST00000420121 VKORC1Q9BQB6 163 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 C1QTNF3Q9BXJ4 246 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 TTTY12Q9BZ98 90 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 EPB41L4BQ9H329 900 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 PROK2Q9HC23 129 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 SEMA4BQ9NPR2 832 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-206ENST00000420121 COPS7AQ9UBW8 275 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 TMCO1Q9UM00 188 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 LIPGQ9Y5X9 500 aa10.2□□□□□ -0.78
SSBP3-206ENST00000420121 A0A087WUV0 522 aaPredicted RBP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 FAM166BA8MTA8 275 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 PRRG2O14669 202 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 CDC40O60508 579 aaKnown RBP eCLIP10.19□□□□□ -0.78
SSBP3-206ENST00000420121 KRT38O76015 456 aa10.19□□□□□ -0.78
SSBP3-206ENST00000420121 PDE9AO76083 593 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms