RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RCN2Q14257 317 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 TGFBIQ15582 683 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 CLEC9AQ6UXN8 241 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 MAATS1Q7Z4T9 603 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 GABPB2Q8TAK5 448 aaPredicted RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 ZNF473Q8WTR7 871 aaKnown RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 MS4A8Q9BY19 250 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 UBQLN3Q9H347 655 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 PPANQ9NQ55 473 aaKnown RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 CTNNAL1Q9UBT7 734 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 MTRF1LQ9UGC7 380 aaKnown RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 BOKQ9UMX3 212 aaPredicted RBP13.05□□□□□ -0.32
NFE4-201ENST00000420058 TEX264Q9Y6I9 313 aa13.05□□□□□ -0.32
NFE4-201ENST00000420058 SONP18583 2426 aaKnown RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 ANKRD33BA6NCL7 494 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 NCF1BA6NI72 391 aaPredicted RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 NCF1CA8MVU1 366 aaPredicted RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 ACSL3O95573 720 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 LY6G6DO95868 133 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 NCF1P14598 390 aaPredicted RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 HIST1H1TP22492 207 aaPredicted RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 CASP2P42575 452 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 KCNC1P48547 511 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 DCAF7P61962 342 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 FRG1Q14331 258 aaKnown RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 BICRALQ6AI39 1079 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 TMEM64Q6YI46 380 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 LACC1Q8IV20 430 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 CIARTQ8N365 385 aaPredicted RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 PBKQ96KB5 322 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 KCNC2Q96PR1 638 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
NFE4-201ENST00000420058 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 COPS7AQ9UBW8 275 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
NFE4-201ENST00000420058 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 FAM95CA0A1B0GW59 222 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 CD8B2A6NJW9 211 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 CLCA1A8K7I4 914 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 SH3BGRLO75368 114 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 IL2RAP01589 272 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 HPNP05981 417 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 HEXAP06865 529 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 ADSLP30566 484 aaPredicted RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 SOX18P35713 384 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 HSPA7P48741 367 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 FNTAP49354 379 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 SLC37A1P57057 533 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 NKX6-1P78426 367 aaPredicted RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 SORDQ00796 357 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 TBL3Q12788 808 aaKnown RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 NTRK2Q16620 822 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 DCST1Q5T197 706 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 ADAMTSL2Q86TH1 951 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 CFAP36Q96G28 342 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 WDYHV1Q96HA8 205 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 FBXL20Q96IG2 436 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 JSRP1Q96MG2 331 aaPredicted RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
NFE4-201ENST00000420058 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 MOCS1Q9NZB8 636 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 CHMP2BQ9UQN3 213 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 SLC6A5Q9Y345 797 aa13.03□□□□□ -0.32
NFE4-201ENST00000420058 MBD3L4A6NDZ8 208 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 MBD3L3A6NE82 208 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 MBD3L5A6NJ08 208 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 TP73O15350 636 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 PRKRAO75569 313 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 TGFB1P01137 390 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 BMP7P18075 431 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 CPN2P22792 545 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 CTSSP25774 331 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 SERPINB3P29508 390 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 FOXF2Q12947 444 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 EBPQ15125 230 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 TBCCQ15814 346 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 KIF18BQ86Y91 864 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
NFE4-201ENST00000420058 LIX1Q8N485 282 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 RNF175Q8N4F7 328 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 C9orf106Q8NAJ2 232 aa13.02□□□□□ -0.33
NFE4-201ENST00000420058 FAM13CQ8NE31 585 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms