RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SCELO95171 688 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 TTC4O95801 387 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 IL18BPO95998 194 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 C1QAP02745 245 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 TNNI3P19429 210 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 CTSSP25774 331 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 GDF1P27539 372 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 GDF5P43026 501 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 STT3AP46977 705 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 KCNC1P48547 511 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 ID2Q02363 134 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 POU4F3Q15319 338 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 SPANXN3Q5MJ09 141 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRAMEF9Q5VWM5 478 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 VASNQ6EMK4 673 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF793Q6ZN11 406 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 LIAT1Q6ZQX7 453 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 KRT78Q8N1N4 520 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 RASGEF1CQ8N431 466 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 SIMC1Q8NDZ2 872 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 CERS2Q96G23 380 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 SENP5Q96HI0 755 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 FBXL20Q96IG2 436 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF597Q96LX8 424 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 PIP5K1AQ99755 562 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 DOHHQ9BU89 302 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 UBQLN3Q9H347 655 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 EHD1Q9H4M9 534 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 OARD1Q9Y530 152 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 KIAA1549Q9HCM3 1950 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 MPDZO75970 2070 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 TLN2Q9Y4G6 2542 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ANKRD33BA6NCL7 494 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ANKDD1BA6NHY2 528 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 HRKO00198 91 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 FGF17O60258 216 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 LRATO95237 230 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 HPNP05981 417 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 COX7A2P14406 83 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 CD22P20273 847 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ATP5A1P25705 553 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 SERPINB3P29508 390 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 CXCR5P32302 372 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 OPRM1P35372 400 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 CDK9P50750 372 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 AGFG1P52594 562 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 SF3B4Q15427 424 aaKnown RBP eCLIP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 NTRK2Q16620 822 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 C18orf21Q32NC0 220 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 NHSL2Q5HYW2 709 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 TBCELQ5QJ74 424 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 DCST1Q5T197 706 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 RNASEH2BQ5TBB1 312 aaKnown RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRSS57Q6UWY2 283 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 DGAT2L6Q6ZPD8 337 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 UBE3DQ7Z6J8 389 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ADAMTSL2Q86TH1 951 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 PPIL6Q8IXY8 311 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 VWA5B2Q8N398 1253 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ACOT4Q8N9L9 421 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 FAM13CQ8NE31 585 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 C7orf57Q8NEG2 295 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ISL2Q96A47 359 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 RHBDF1Q96CC6 855 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 NTNG2Q96CW9 530 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 WDR34Q96EX3 536 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 JSRP1Q96MG2 331 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 F2RL3Q96RI0 385 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 EGFL8Q99944 293 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 MAPKAP1Q9BPZ7 522 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 NAT9Q9BTE0 207 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 EPB41L4BQ9H329 900 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 GALNT8Q9NY28 637 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 GPRC5BQ9NZH0 403 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ADAM21Q9UKJ8 722 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF490Q9ULM2 529 aaPredicted RBP9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZANQ9Y493 2812 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 HIVEP2P31629 2446 aa9.34□□□□□ -0.91
TNFAIP3-202ENST00000420009 ATRQ13535 2644 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 SH3D21A4FU49 640 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 INAFM1C9JVW0 142 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 BANF1O75531 89 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 HIST1H1TP22492 207 aaPredicted RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 PLIN5Q00G26 463 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 TGM3Q08188 693 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 EBPQ15125 230 aaKnown RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 TSNQ15631 228 aaKnown RBP9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 CYP1B1Q16678 543 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
TNFAIP3-202ENST00000420009 FNDC7Q5VTL7 733 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms