RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CSTF3Q12996 717 aaKnown RBP19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 PCLAFQ15004 111 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 SPRED3Q2MJR0 410 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 RNFT1Q5M7Z0 435 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 NDUFAF5Q5TEU4 345 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 CYP20A1Q6UW02 462 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 MDGA2Q7Z553 956 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 SIAH3Q8IW03 269 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 ST13P4Q8IZP2 240 aaPredicted RBP19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 DNAJB8Q8NHS0 232 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 RDH11Q8TC12 318 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 SENP5Q96HI0 755 aaPredicted RBP19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 PARD6BQ9BYG5 372 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 OR8D2Q9GZM6 311 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 KLHL1Q9NR64 748 aa19.14■□□□□ 0.65
PKNOX1-202ENST00000418336 SLC25A12O75746 678 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 OR2J2O76002 312 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 NADKO95544 446 aaPredicted RBP19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 GALNSP34059 522 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 CCT5P48643 541 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 CYB561P49447 251 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 NAGLUP54802 743 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 BIKQ13323 160 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 FHL5Q5TD97 284 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 LYPD8Q6UX82 237 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 HSDL2Q6YN16 418 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 GALNTL5Q7Z4T8 443 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 RIBC1Q8N443 379 aaPredicted RBP19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 C1orf52Q8N6N3 182 aaKnown RBP19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 PRR7Q8TB68 274 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 DOK4Q8TEW6 326 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 CCDC126Q96EE4 140 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 DGAT2Q96PD7 388 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 RASL10BQ96S79 203 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 TMEM109Q9BVC6 243 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 TIMM22Q9Y584 194 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 PCDHA9Q9Y5H5 950 aa19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 UTP20O75691 2785 aaKnown RBP19.13■□□□□ 0.65
PKNOX1-202ENST00000418336 CYSRT1A8MQ03 144 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 FCHO1O14526 889 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 COPEO14579 308 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 OR6B1O95007 311 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 ENO1P06733 434 aaKnown RBP19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 CT62P0C5K7 136 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 SLC35E2P0CK97 266 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 CREB1P16220 341 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 TLX1P31314 330 aaPredicted RBP19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 OC90Q02509 493 aaPredicted RBP19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 ZNF750Q32MQ0 723 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 CCNYL2Q5T2Q4 361 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 OR52E8Q6IFG1 317 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 CHERPQ8IWX8 916 aaKnown RBP19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 C7orf57Q8NEG2 295 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 SUN3Q8TAQ9 357 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 METTL6Q8TCB7 284 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 FBXL20Q96IG2 436 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 SIRT5Q9NXA8 310 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 VPS29Q9UBQ0 182 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 STK38LQ9Y2H1 464 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 YARS2Q9Y2Z4 477 aaKnown RBP19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 PLLPQ9Y342 182 aa19.12■□□□□ 0.65
PKNOX1-202ENST00000418336 ARHGAP10A1A4S6 786 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 LDLRP01130 860 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 KRT6AP02538 564 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 KRT6BP04259 564 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 CPA3P15088 417 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 CD46P15529 392 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 TNNI3P19429 210 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 KRT6CP48668 564 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 SLC37A1P57057 533 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 PLIN5Q00G26 463 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 HMGCS1Q01581 520 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 DUSP2Q05923 314 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 SLC48A1Q6P1K1 146 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 C10orf107Q8IVU9 208 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 ZNF441Q8N8Z8 693 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 APIPQ96GX9 242 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 APOPT1Q96IL0 206 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 ROPN1BQ9BZX4 212 aaPredicted RBP19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 ROPN1Q9HAT0 212 aaPredicted RBP19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 PRM3Q9NNZ6 103 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 DEPPQ9NTK1 212 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 AHSPQ9NZD4 102 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 CCL27Q9Y4X3 112 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 ICE1Q9Y2F5 2266 aa19.11■□□□□ 0.65
PKNOX1-202ENST00000418336 TLDC2A0PJX2 215 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 WWP2O00308 870 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 ULK1O75385 1050 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 STSP08842 583 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 S1PR1P21453 382 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SOX3P41225 446 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SSR4P51571 173 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 KCNK10P57789 538 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 MGAT2Q10469 447 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 GALNT18Q6P9A2 607 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 PAGE2Q7Z2X7 111 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 SULF2Q8IWU5 870 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 CCNYL1Q8N7R7 359 aa19.1■□□□□ 0.65
PKNOX1-202ENST00000418336 GBP7Q8N8V2 638 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms