RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ERVK-21P61565 698 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 RPL6Q02878 288 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CRYZQ08257 329 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GRM7Q14831 915 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF169Q14929 603 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CEACAM20Q6UY09 585 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 FAM92BQ6ZTR7 304 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 WDR53Q7Z5U6 358 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GEMIN6Q8WXD5 167 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SMG7Q92540 1137 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CIDECQ96AQ7 238 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 FCRL1Q96LA6 429 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 EBPLQ9BY08 206 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CDCP1Q9H5V8 836 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 HCN3Q9P1Z3 774 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SCN8AQ9UQD0 1980 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 HEPACAM2A8MVW5 462 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR39O43194 453 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 LRRTM2O43300 516 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SH3BP5O60239 455 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 LDOC1O95751 146 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SOD1P00441 154 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 RPS12P25398 132 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 AP1S2P56377 157 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 DCDC1P59894 354 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ILKQ13418 452 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ASB18Q6ZVZ8 466 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 PPTC7Q8NI37 304 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 HASPINQ8TF76 798 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ZFP42Q96MM3 310 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ERMAPQ96PL5 475 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 UBL7Q96S82 380 aaPredicted RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 CIPCQ9C0C6 399 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 SERHL2Q9H4I8 314 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 NMUR1Q9HB89 426 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 PDFQ9HBH1 243 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 ISYNA1Q9NPH2 558 aa7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 TESQ9UGI8 421 aaKnown RBP7.64□□□□□ -1.19
HMGXB4-202ENST00000418170 KCNE1BA0A087WTH5 132 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 TEX13CA0A0J9YWL9 993 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 H7C0S8 307 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 MMP20O60882 483 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ADAP00813 363 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 HRGP04196 525 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GAAP10253 952 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 NR2F6P10588 404 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 LAMP1P11279 417 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 EPHA4P54764 986 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ERVFC1P60507 584 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR85P60893 370 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CSTF1Q05048 431 aaKnown RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GAB1Q13480 694 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GANABQ14697 944 aaKnown RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 HEPACAMQ14CZ8 416 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GGTA1PQ4G0N0 100 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 RGS7BPQ6MZT1 257 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CASP12Q6UXS9 341 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 BCDIN3DQ7Z5W3 292 aaKnown RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 PIAS4Q8N2W9 510 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 UXS1Q8NBZ7 420 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 IGSF8Q969P0 613 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 RFT1Q96AA3 541 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 KLRG1Q96E93 195 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 MGME1Q9BQP7 344 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ZNF436Q9C0F3 470 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 MROH8Q9H579 483 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 BPIFA1Q9NP55 256 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 NUBP2Q9Y5Y2 271 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CACNG2Q9Y698 323 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ENPP4Q9Y6X5 453 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CHD5Q8TDI0 1954 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 DOCK3Q8IZD9 2030 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 TRDV1A0A1B0GX56 115 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 G3V3Q6 166 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 SMAD6O43541 496 aaKnown RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 VSX2P58304 361 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GPR68Q15743 365 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 NTRK2Q16620 822 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 RAET1GQ6H3X3 334 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 TCEANCQ8N8B7 351 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CLRN3Q8NCR9 226 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ATOH1Q92858 354 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 AHCYL2Q96HN2 611 aaKnown RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 RPRD1AQ96P16 312 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 SYT17Q9BSW7 474 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 THAP7Q9BT49 309 aaPredicted RBP7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 TRPM5Q9NZQ8 1165 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 NLRC5Q86WI3 1866 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 CCDC88CQ9P219 2028 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 LOC105369274A0A096LPK9 316 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 GABRR3A8MPY1 467 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 NCR1O76036 304 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 FCER2P06734 321 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 SYPP08247 313 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 TFPIP10646 304 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 RHCEP18577 417 aa7.63□□□□□ -1.19
HMGXB4-202ENST00000418170 ELK1P19419 428 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms