RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TRIOO75962 3097 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 GLOD5A6NK44 160 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 M0QX08 132 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 PIAS2O75928 621 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 SMNDC1O75940 238 aaKnown RBP eCLIP15.85■□□□□ 0.135e-8■■■□□ 15.6
SSBP3-205ENST00000417664 THRBP10828 461 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 FPR1P21462 350 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 AQP1P29972 269 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 DNAJA1P31689 397 aaKnown RBP15.85■□□□□ 0.13
SSBP3-205ENST00000417664 KHKP50053 298 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 LIM2P55344 173 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 SKP1P63208 163 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 VLDLRP98155 873 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 TP53BP2Q13625 1128 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 GNA13Q14344 377 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF761Q86XN6 746 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-205ENST00000417664 MAFAQ8NHW3 353 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-205ENST00000417664 RASSF5Q8WWW0 418 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 TCTN2Q96GX1 697 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 C10orf90Q96M02 699 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 CHRNA10Q9GZZ6 450 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 GABARAPL1Q9H0R8 117 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 P2RX2Q9UBL9 471 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 C3orf18Q9UK00 162 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 SNX11Q9Y5W9 270 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 CEP192Q8TEP8 1941 aa15.85■□□□□ 0.13
SSBP3-205ENST00000417664 KNL1Q8NG31 2342 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 TMEM229AB2RXF0 380 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 HMGN4O00479 90 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 EMC8O43402 210 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 PRKRAO75569 313 aaKnown RBP15.84■□□□□ 0.13
SSBP3-205ENST00000417664 TFPTP0C1Z6 253 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 ST6GAL1P15907 406 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 CSNK1EP49674 416 aaKnown RBP15.84■□□□□ 0.13
SSBP3-205ENST00000417664 CASP9P55211 416 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 GK3PQ14409 553 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 IQCCQ4KMZ1 466 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 C14orf28Q4W4Y0 310 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 TNFAIP8L2Q6P589 184 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-205ENST00000417664 GALNT10Q86SR1 603 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 C11orf74Q86VG3 221 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 CCDC116Q8IYX3 515 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 OR4K14Q8NGD5 310 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 OR10Q1Q8NGQ4 319 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 ZCCHC10Q8TBK6 192 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 SLC38A5Q8WUX1 472 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 GEMIN6Q8WXD5 167 aaKnown RBP15.84■□□□□ 0.13
SSBP3-205ENST00000417664 KLHL6Q8WZ60 621 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 TAMM41Q96BW9 452 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 TMEM121BQ9BXQ6 578 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-205ENST00000417664 KLHL25Q9H0H3 589 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 THSD1Q9NS62 852 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 THEGQ9P2T0 379 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 EPHA6Q9UF33 1036 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 ABCG2Q9UNQ0 655 aa15.84■□□□□ 0.13
SSBP3-205ENST00000417664 ADAMDEC1O15204 470 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 B4GALT2O60909 372 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 EIF2S1P05198 315 aaKnown RBP15.83■□□□□ 0.13
SSBP3-205ENST00000417664 MATN1P21941 496 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 PPP2R1BP30154 601 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 RAD23AP54725 363 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 ADARB1P78563 741 aaKnown RBP15.83■□□□□ 0.13
SSBP3-205ENST00000417664 RUNX2Q13950 521 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 TTC23Q5W5X9 447 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 USP53Q70EK8 1073 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF438Q7Z4V0 828 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 CARFQ8N187 725 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 LRRC25Q8N386 305 aaPredicted RBP15.83■□□□□ 0.13
SSBP3-205ENST00000417664 CYGBQ8WWM9 190 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 ZNF607Q96SK3 696 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 CD180Q99467 661 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 EPYCQ99645 322 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 EPB41L1Q9H4G0 881 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 REEP1Q9H902 201 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 NTMQ9P121 344 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 PCDHGB3Q9Y5G1 929 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 ORC6Q9Y5N6 252 aa15.83■□□□□ 0.13
SSBP3-205ENST00000417664 EIF4E1BA6NMX2 242 aaKnown RBP15.83■□□□□ 0.12
SSBP3-205ENST00000417664 hCG_2039718K7EN88 272 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 ASNA1O43681 348 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 GALR3O60755 368 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-205ENST00000417664 SLITRK5O94991 958 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 PGM3O95394 542 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 SNAP29O95721 258 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 IFI6P09912 130 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 FEN1P39748 380 aaKnown RBP15.83■□□□□ 0.12
SSBP3-205ENST00000417664 VSX2P58304 361 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-205ENST00000417664 PPP1CAP62136 330 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 MYBPC1Q00872 1141 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 PRAMEF8Q5VWM4 474 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 PRAMEF7Q5VXH5 474 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 USP51Q70EK9 711 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 MCATQ8IVS2 390 aaKnown RBP15.83■□□□□ 0.12
SSBP3-205ENST00000417664 ABCA7Q8IZY2 2146 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 ARL10Q8N8L6 244 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 SPPL2AQ8TCT8 520 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 ELP4Q96EB1 424 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 TMEM19Q96HH6 336 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 MUTYHQ9UIF7 546 aa15.83■□□□□ 0.12
SSBP3-205ENST00000417664 WASHC1A8K0Z3 465 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms