RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ZNF670Q9BS34 389 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 OSBPL2Q9H1P3 480 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 RBFOX1Q9NWB1 397 aaKnown RBP19.46■□□□□ 0.71
AP1S3-205ENST00000415298 NEU3Q9UQ49 428 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 SAMHD1Q9Y3Z3 626 aaKnown RBP19.46■□□□□ 0.71
AP1S3-205ENST00000415298 PCDHB14Q9Y5E9 798 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 ARL4AP40617 200 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.46■□□□□ 0.71
AP1S3-205ENST00000415298 MZT2BQ6NZ67 158 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 EIF3MQ7L2H7 374 aaKnown RBP19.46■□□□□ 0.71
AP1S3-205ENST00000415298 KIAA0907Q7Z7F0 614 aaPredicted RBP19.46■□□□□ 0.71
AP1S3-205ENST00000415298 CFAP52Q8N1V2 620 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 IGSF8Q969P0 613 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 SLC29A3Q9BZD2 475 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 KRT84Q9NSB2 600 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 CFAP97Q9P2B7 532 aa19.46■□□□□ 0.71
AP1S3-205ENST00000415298 M0R233 179 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 ZNF197O14709 1029 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 GSTA4O15217 222 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 CHP2O43745 196 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 POU2F2P09086 479 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 MUC1P15941 1255 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 MAZP56270 477 aaKnown RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 UBE2IP63279 158 aaKnown RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 RAPSNQ13702 412 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 ACER2Q5QJU3 275 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 THEM4Q5T1C6 240 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 FBXL22Q6P050 247 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 BLOC1S3Q6QNY0 202 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 CES3Q6UWW8 571 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 NLRC3Q7RTR2 1065 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 CIR1Q86X95 450 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 RNF130Q86XS8 419 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 FGF13Q92913 245 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 P2RY11Q96G91 374 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 CD244Q9BZW8 370 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 OR51E2Q9H255 320 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 PADI2Q9Y2J8 665 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 RNF215Q9Y6U7 377 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 RHPN2P1A8MT19 583 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 LEFTY2O00292 366 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 TCAPO15273 167 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 RECQL5O94762 991 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 C9P02748 559 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 ANXA6P08133 673 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 ERCC2P18074 760 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 TPI1P60174 286 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 DEFA5Q01523 94 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 IRF4Q15306 451 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 ARHGAP15Q53QZ3 475 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 LCN1P1Q5VSP4 162 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 DARS2Q6PI48 645 aaKnown RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 SEZ6L2Q6UXD5 910 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 PRR18Q8N4B5 295 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 IPMKQ8NFU5 416 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 SH3RF2Q8TEC5 729 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 C2CD4CQ8TF44 421 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 LRRC3BQ96PB8 259 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 CDX2Q99626 313 aaPredicted RBP19.45■□□□□ 0.7
AP1S3-205ENST00000415298 IL1RL2Q9HB29 575 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 FOLH1BQ9HBA9 442 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 DHRS7Q9Y394 339 aa19.45■□□□□ 0.7
AP1S3-205ENST00000415298 TRBV23OR9-2A0A075B6M9 112 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 FAM20BO75063 409 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 FGF19O95750 216 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 LPLP06858 475 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 RAB4AP20338 218 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 SGSHP51688 502 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 GLYR1Q49A26 553 aaPredicted RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 LIPMQ5VYY2 423 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 HIPK1Q86Z02 1210 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 NPAS3Q8IXF0 933 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 ZNF683Q8IZ20 524 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 PLD4Q96BZ4 506 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 MOCOSQ96EN8 888 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 C14orf144Q96I85 54 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 MRGPRX2Q96LB1 330 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 RAB6BQ9NRW1 208 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 TDP1Q9NUW8 608 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 C14orf105Q9NVL8 296 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 MBD1Q9UIS9 605 aaPredicted RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 CLCA3PQ9Y6N3 262 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 WASH4PA8MWX3 477 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 TSPAN3O60637 253 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 MT-CYBP00156 380 aaPredicted RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 PVALBP20472 110 aaPredicted RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 DDX6P26196 483 aaKnown RBP eCLIP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 PDHA2P29803 388 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 ETV5P41161 510 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 VIPR2P41587 438 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 TRMT11Q7Z4G4 463 aaKnown RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 PLD6Q8N2A8 252 aaKnown RBP19.44■□□□□ 0.7
AP1S3-205ENST00000415298 UPRTQ96BW1 309 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 NSMCE2Q96MF7 247 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 SFXN2Q96NB2 322 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 SIGLEC11Q96RL6 698 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 CHCHD6Q9BRQ6 235 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 RHNO1Q9BSD3 238 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 GDE1Q9NZC3 331 aa19.44■□□□□ 0.7
AP1S3-205ENST00000415298 KCNK1O00180 336 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms