RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 IL10RBQ08334 325 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NIPAL4Q0D2K0 466 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 SLC10A7Q0GE19 358 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PRKAA1Q13131 559 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 MYBPHQ13203 477 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 XRCC4Q13426 336 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 KRT33BQ14525 404 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 RFTN1Q14699 578 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 SLC18A3Q16572 532 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 C3AR1Q16581 482 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 EXOC3L4Q17RC7 722 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DPCR1Q3MIW9 517 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 SLC9B1Q4ZJI4 515 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ALS2CLQ60I27 953 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ATL3Q6DD88 541 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ISLR2Q6UXK2 745 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 Q6YL49 198 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NCCRP1Q6ZVX7 275 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 BNIPLQ7Z465 357 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 HOOK3Q86VS8 718 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 OOSP2Q86WS3 158 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TRAPPC5Q8IUR0 188 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 OR1L3Q8NH93 324 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 SPATA3Q8NHX4 192 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 JOSD2Q8TAC2 188 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 GDAP1Q8TB36 358 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 CA5BP1Q8WTZ4 195 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NSMCE1Q8WV22 266 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TEKT4Q8WW24 435 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NELFBQ8WX92 580 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NTAN1Q96AB6 310 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PTERQ96BW5 349 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 INTS12Q96CB8 462 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 FBXL20Q96IG2 436 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PSKH2Q96QS6 385 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NUDCD1Q96RS6 583 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 C11orf70Q9BRQ4 267 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 LHPPQ9H008 270 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 CARD9Q9H257 536 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DHX35Q9H5Z1 703 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 NT5MQ9NPB1 228 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DUSP22Q9NRW4 184 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TXLNGQ9NUQ3 528 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 IMP3Q9NV31 184 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PKD2L2Q9NZM6 624 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 GIMAP2Q9UG22 337 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DNAJC12Q9UKB3 198 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 RCOR1Q9UKL0 485 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DTX4Q9Y2E6 619 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PKP3Q9Y446 797 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TRAV17A0A0B4J275 112 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 A0A0J9YYE9 177 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 BICDL2A1A5D9 508 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 OR5K3A6NET4 321 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 C2CD4BA6NLJ0 364 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 LRRC53A6NM62 1247 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 PES1O00541 588 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 DSCR3O14972 297 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 MTX2O75431 263 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 ERAL1O75616 437 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 KLF7O75840 302 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CDK14O94921 469 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 PGM3O95394 542 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 LSM8O95777 96 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 TRBC1P01850 177 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CRYABP02511 175 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CD63P08962 238 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CBSLP0DN79 551 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 KRT3P12035 628 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 AGAP20933 346 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 SAT1P21673 171 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 DNASE1P24855 282 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CDH5P33151 784 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 RFC1P35251 1148 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CBSP35520 551 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 PPARGP37231 505 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 HSPA9P38646 679 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 PTPN9P43378 593 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 MMP13P45452 471 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CPA2P48052 419 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 SPINT3P49223 89 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CLCNKAP51800 687 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 KPNA2P52292 529 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 SLC37A1P57057 533 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 DCDP81605 110 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 DMPKQ09013 629 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 GALNT3Q14435 633 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 RASA2Q15283 850 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 TCP11X2Q5H9J9 407 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 PPP6R3Q5H9R7 873 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 CES4AQ5XG92 561 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 RPUSD3Q6P087 351 aaKnown RBP4.29□□□□□ -1.72
PTPRK-210ENST00000415055 C3P1Q6ZMU1 363 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 ARCQ7LC44 396 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 SLC46A3Q7Z3Q1 461 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 BIVMQ86UB2 503 aa4.29□□□□□ -1.72
PTPRK-210ENST00000415055 ARHGAP12Q8IWW6 846 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms