RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 LIPT1Q9Y234 373 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 DNAJC15Q9Y5T4 150 aa13.17□□□□□ -0.3
SMARCA4-202ENST00000413806 STC2O76061 302 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 CD9P21926 228 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 HSD11B1P28845 292 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 HOXC12P31275 282 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 GATMP50440 423 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 PIGFQ07326 219 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 CRTC1Q6UUV9 634 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 TMEM174Q8WUU8 243 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 NANSQ9NR45 359 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 FAM118AQ9NWS6 357 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ERVK13-1Q9NX77 482 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 PCTPQ9UKL6 214 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 SSX5O60225 188 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 IL3P08700 152 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 BMP2P12643 396 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 RHCEP18577 417 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 POU6F2P78424 691 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ZMYND11Q15326 602 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 PCBP2Q15366 365 aaKnown RBP eCLIP13.16□□□□□ -0.38e-6■■□□□ 13.7
SMARCA4-202ENST00000413806 C17orf62Q9BQA9 187 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 MGAT4CQ9UBM8 478 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ADAMTS5Q9UNA0 930 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 HMGCLP35914 325 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 FAM122CQ6P4D5 195 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 C12orf40Q86WS4 652 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 PLA2G15Q8NCC3 412 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 OR7G2Q8NG99 324 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 GPR150Q8NGU9 434 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 F5H0A9 414 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 H2AFB2P0C5Z0 115 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 S100PP25815 95 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 OR1E2P47887 323 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 WNT7BP56706 349 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 OR4D2P58180 307 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 E2F1Q01094 437 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC27A4Q6P1M0 643 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 FAM198BQ6UWH4 519 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 Q8N402 240 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 DHRS4Q9BTZ2 278 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 TMEM184CQ9NVA4 438 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF208O43345 1280 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 KAT7O95251 611 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 CLUP10909 449 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 GP1BBP13224 206 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 AGXTP21549 392 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ERVK-25P63136 954 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 MANEALQ5VSG8 457 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 NOXA1Q86UR1 476 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 TAS2R10Q9NYW0 307 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ERVK-18Q9QC07 812 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 EMC8O43402 210 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 SOX30O94993 753 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 HOXB2P14652 356 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ETV4P43268 484 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 KCNC1P48547 511 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ARSDP51689 593 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 DCDC5Q6ZRR9 648 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 MRPL10Q7Z7H8 261 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 KBTBD6Q86V97 674 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 COMTD1Q86VU5 262 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 SETD6Q8TBK2 473 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 RAB8BQ92930 207 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF689Q96CS4 500 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 DHRS1Q96LJ7 313 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 TM9SF2Q99805 663 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 PTGDR2Q9Y5Y4 395 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 M0QZQ0 153 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 SOCS2O14508 198 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 IFNA17P01571 189 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 STATHP02808 62 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 HNRNPA1P09651 372 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 MSR1P21757 451 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 GSTM2P28161 218 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 BATFQ16520 125 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 SMG9Q9H0W8 520 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
SMARCA4-202ENST00000413806 MVB12BQ9H7P6 319 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms