RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GPR19Q15760 415 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PRSS53Q2L4Q9 553 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.76■□□□□ 0.27
SDCBP-202ENST00000413219 KIAA1211LQ6NV74 962 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 PAQR6Q6TCH4 344 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CD300LDQ6UXZ3 194 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 DPY19L3Q6ZPD9 716 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 LAPTM4BQ86VI4 370 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 CRIPAKQ8N1N5 446 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 UBASH3BQ8TF42 649 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 NEURL3Q96EH8 262 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 FAM8A1Q9UBU6 413 aa16.76■□□□□ 0.27
SDCBP-202ENST00000413219 IRGMA1A4Y4 181 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 PIPSLA2A3N6 862 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 ARHGEF9O43307 516 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 TP53P04637 393 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-202ENST00000413219 CLEC2LP0C7M8 214 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 SDC2P34741 201 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 IL12RB1P42701 662 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 MAP2K3P46734 347 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 PREPP48147 710 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 GZMKP49863 264 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 TNK1Q13470 666 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 TPBGQ13641 420 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 EFR3AQ14156 821 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 NDUFA9Q16795 377 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 KLHL22Q53GT1 634 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 TXNDC8Q6A555 127 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 C22orf42Q6IC83 251 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 METAP1DQ6UB28 335 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-202ENST00000413219 PLET1Q6UQ28 207 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF730Q6ZMV8 503 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 WDR53Q7Z5U6 358 aaPredicted RBP16.75■□□□□ 0.27
SDCBP-202ENST00000413219 DUSP18Q8NEJ0 188 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 PPP1R16AQ96I34 528 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 ZSCAN5AQ9BUG6 496 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 OR51B5Q9H339 312 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 CXorf36Q9H7Y0 433 aa16.75■□□□□ 0.27
SDCBP-202ENST00000413219 MRPS18AQ9NVS2 196 aaKnown RBP16.75■□□□□ 0.27
SDCBP-202ENST00000413219 OR6C70A6NIJ9 312 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TGFB1P01137 390 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 NPPBP16860 134 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ALAS2P22557 587 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 PRLHRP49683 370 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ATN1P54259 1190 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 WNT4P56705 351 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TBPL1P62380 186 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 MZT2BQ6NZ67 158 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 HSD11B1LQ7Z5J1 315 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 CAMKK1Q8N5S9 505 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SLC38A5Q8WUX1 472 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF480Q8WV37 535 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 FOXJ1Q92949 421 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 MED30Q96HR3 178 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF354BQ96LW1 612 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SOSTQ9BQB4 213 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ZNF334Q9HCZ1 680 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ZSCAN32Q9NX65 697 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 PCDHGB7Q9Y5F8 929 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SPIN1Q9Y657 262 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TMEM129A0AVI4 362 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SLC30A4O14863 429 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SEMA7AO75326 666 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 C1QBP02746 253 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 BCHEP06276 602 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 KLK1P06870 262 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 IL3P08700 152 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 NR2F6P10588 404 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ETV5P41161 510 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ETV1P50549 477 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 FOXD4Q12950 439 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 DUSP6Q16828 381 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SYT14P1Q58G82 188 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 LRRC73Q5JTD7 316 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 FAM209AQ5JX71 171 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ATAT1Q5SQI0 421 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 HENMT1Q5T8I9 393 aaKnown RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 BRAT1Q6PJG6 821 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 GDPD4Q6W3E5 623 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 QSOX2Q6ZRP7 698 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TRIM48Q8IWZ4 208 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 LINC00471Q8N535 108 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 NATD1Q8N6N6 113 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 HORMAD2Q8N7B1 307 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 KATNB1Q9BVA0 655 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SGPP1Q9BX95 441 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SLC6A16Q9GZN6 736 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 FGF20Q9NP95 211 aaPredicted RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 MIEF1Q9NQG6 463 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 RBFOX1Q9NWB1 397 aaKnown RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TVP23BQ9NYZ1 205 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 TAAR2Q9P1P5 351 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 GSTK1Q9Y2Q3 226 aa16.74■□□□□ 0.27
SDCBP-202ENST00000413219 SF3B6Q9Y3B4 125 aaKnown RBP16.74■□□□□ 0.27
SDCBP-202ENST00000413219 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
SDCBP-202ENST00000413219 PRKYO43930 277 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms