RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 RSPRY1Q96DX4 576 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 MTERF3Q96E29 417 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 POLR2J2Q9GZM3 115 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 EQTNQ9NQ60 294 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ENOPH1Q9UHY7 261 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ITGB7P26010 798 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ELAVL3Q14576 367 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 PLAG1Q6DJT9 500 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 UNC5DQ6UXZ4 953 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 LINC00299Q6ZSB3 139 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 MINDY2Q8NBR6 621 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 SETD7Q8WTS6 366 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 OR5P2Q8WZ92 322 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 C12orf66Q96MD2 445 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 BBS4Q96RK4 519 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 DPEP2Q9H4A9 486 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 EPHX3Q9H6B9 360 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ZNF232Q9UNY5 417 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 KCNK6Q9Y257 313 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 PAPLNO95428 1278 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 SPNP16150 400 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 PTNP21246 168 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 UGT2B10P36537 528 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 LASP1Q14847 261 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 ERN2Q76MJ5 926 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 FAM129CQ86XR2 697 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 FBXO15Q8NCQ5 510 aaPredicted RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 OR4D11Q8NGI4 311 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 ZBED6CLQ96FA7 236 aaPredicted RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 ASPNQ9BXN1 380 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 QRSL1Q9H0R6 528 aaKnown RBP13.12□□□□□ -0.31
NUB1-201ENST00000413040 MVB12BQ9H7P6 319 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
NUB1-201ENST00000413040 HEPACAM2A8MVW5 462 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 LCMT2O60294 686 aaKnown RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 UGT2B17O75795 530 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 MFN2O95140 757 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 RECKO95980 971 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 PAK4O96013 591 aaPredicted RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 RB1P06400 928 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 TGM4P49221 684 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 CCR8P51685 355 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 TIMM50Q3ZCQ8 353 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 GANCQ8TET4 914 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 WDR34Q96EX3 536 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 ZNF607Q96SK3 696 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 TRMT61BQ9BVS5 477 aaKnown RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 FNDC11Q9BVV2 318 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 OR51I1Q9H343 314 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 FTSJ1Q9UET6 329 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 PDZK1P1A8MUH7 402 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 B4GALT2O60909 372 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 SEMA7AO75326 666 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 GPX5O75715 221 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 FGF19O95750 216 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 APOA1P02647 267 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 OSMP13725 252 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 CXCR2P25025 360 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 EPHA5P54756 1037 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 PCDH1Q08174 1060 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 DOC2BQ14184 412 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 CCBE1Q6UXH8 406 aaPredicted RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 ZNF367Q7RTV3 350 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 PDZD3Q86UT5 571 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 NUDT13Q86X67 352 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 KLHDC8AQ8IYD2 350 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 SLC35G5Q96KT7 338 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 TREX2Q9BQ50 279 aaPredicted RBP13.11□□□□□ -0.31
NUB1-201ENST00000413040 ANKRA2Q9H9E1 313 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 POU2F3Q9UKI9 436 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 FBXW2Q9UKT8 454 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 KLHL20Q9Y2M5 609 aa13.11□□□□□ -0.31
NUB1-201ENST00000413040 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms