RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 B3GNTL1Q67FW5 361 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 FAM71E1Q6IPT2 247 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 FAM180BQ6P0A1 224 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 TMEM132CQ8N3T6 1108 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 B3GNT7Q8NFL0 401 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.338e-8■■■■■ 32.7
CPNE1-206ENST00000412056 LRRC8CQ8TDW0 803 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 ELP5Q8TE02 316 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 PTPMT1Q8WUK0 201 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 NCLNQ969V3 563 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 KLHL29Q96CT2 875 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 TSSK3Q96PN8 268 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 SMAD5Q99717 465 aaKnown RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 C1orf50Q9BV19 199 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 KCNK13Q9HB14 408 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF223Q9UK11 482 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 UTS2RQ9UKP6 389 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 G3BP2Q9UN86 482 aaKnown RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 PPIEQ9UNP9 301 aaKnown RBP13.02□□□□□ -0.33
CPNE1-206ENST00000412056 TMED5Q9Y3A6 229 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 LOC400499M0QZD8 3231 aa13.02□□□□□ -0.33
CPNE1-206ENST00000412056 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ATRXP46100 2492 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 C17orf105B2RV13 164 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 OR10H2O60403 315 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 DDAH2O95865 285 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 CPMP14384 443 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 COX7A2P14406 83 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 DRD2P14416 443 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 TNNI3P19429 210 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 SOX11P35716 441 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 FEN1P39748 380 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 XKP51811 444 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 AP2B1P63010 937 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 HEPACAMQ14CZ8 416 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 PRSS53Q2L4Q9 553 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 HSP90B2PQ58FF3 399 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 FCRLBQ6BAA4 426 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ASB18Q6ZVZ8 466 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF321PQ8N8H1 164 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 FNDC5Q8NAU1 212 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 APCDD1LQ8NCL9 501 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 LSM14AQ8ND56 463 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 OR14A16Q8NHC5 309 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 CKAP2Q8WWK9 683 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 EXOSC8Q96B26 276 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 PELOQ9BRX2 385 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 OR8D2Q9GZM6 311 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 MEAF6Q9HAF1 191 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 PTGFRNQ9P2B2 879 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 BAIAP2L1Q9UHR4 511 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 EXO1Q9UQ84 846 aaKnown RBP13.01□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF451Q9Y4E5 1061 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 CLCA3PQ9Y6N3 262 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 COL6A6A6NMZ7 2263 aa13.01□□□□□ -0.33
CPNE1-206ENST00000412056 NUP214P35658 2090 aaPredicted RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 TRBV11-1A0A0K0K1C0 115 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 SDHDO14521 159 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 HDAC3O15379 428 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 LRATO95237 230 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 PRB1P04280 392 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 SLC35E2P0CK97 266 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 SFTPCP11686 197 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 BCKDHAP12694 445 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 PORP16435 677 aaPredicted RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 DDCP20711 480 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 PTGER1P34995 402 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 CLCN2P51788 898 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 GPR143P51810 404 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 BIKQ13323 160 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 IL23RQ5VWK5 629 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 ISLR2Q6UXK2 745 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 IKBIPQ70UQ0 350 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 MAVSQ7Z434 540 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 TICAM1Q8IUC6 712 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 LIX1Q8N485 282 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 MORN4Q8NDC4 146 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 C7orf57Q8NEG2 295 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF721Q8TF20 911 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 GFM2Q969S9 779 aaKnown RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 VMP1Q96GC9 406 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 RBM18Q96H35 190 aaKnown RBP13□□□□□ -0.33
CPNE1-206ENST00000412056 C7orf26Q96N11 449 aa13□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF681Q96N22 645 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms