RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LDOC1O95751 146 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 PPIBP23284 216 aaKnown RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 GRK6P43250 576 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 CCT3P49368 545 aaKnown RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 DUSP3P51452 185 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 XKP51811 444 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 PRKAG1P54619 331 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 RHDQ02161 417 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 FOLH1Q04609 750 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 ERV3-1Q14264 604 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 AAGABQ6PD74 315 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 GPR155Q7Z3F1 870 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 SERPINA11Q86U17 422 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 PROSER1Q86XN7 944 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 GPR135Q8IZ08 494 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 OR4D9Q8NGE8 314 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 NSMCE2Q96MF7 247 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 GFM1Q96RP9 751 aaKnown RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 MUC13Q9H3R2 512 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 ANKRA2Q9H9E1 313 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 CUTCQ9NTM9 273 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 CORO2BQ9UQ03 480 aa11.73□□□□□ -0.53
CHMP3-204ENST00000409727 TMEM184BQ9Y519 407 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-204ENST00000409727 TCRBV3S1A0A5B6 114 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FGF17O60258 216 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 KRT75O95678 551 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 C8BP07358 591 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MPIP34949 423 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 AVPR1BP47901 424 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MVDP53602 400 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ITGA1P56199 1179 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 RAB38P57729 211 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SLC34A1Q06495 639 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SPEM2Q0P670 501 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FAM53BQ14153 422 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 TNFAIP8L2Q6P589 184 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 RNF111Q6ZNA4 994 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 GALNT10Q86SR1 603 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 KMT5CQ86Y97 462 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 PTOV1Q86YD1 416 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ZZZ3Q8IYH5 903 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 CANT1Q8WVQ1 401 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 KAT2AQ92830 837 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF681Q96N22 645 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 NPLQ9BXD5 320 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FANCEQ9HB96 536 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SERTAD3Q9UJW9 196 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 DHRS12A0PJE2 317 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FITM1A5D6W6 292 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 TPST1O60507 370 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 B4GALT2O60909 372 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 NSA2O95478 260 aaKnown RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 AQP1P29972 269 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MC3RP41968 323 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 OR1D4P47884 311 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 PRIM2P49643 509 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 POLE2P56282 527 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SKP1P63208 163 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MRPS35P82673 323 aaKnown RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 MLC1Q15049 377 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ADRM1Q16186 407 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FXNQ16595 210 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 INAVAQ3KP66 663 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 LRRC23Q53EV4 343 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 C1orf189Q5VU69 101 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 GARNL3Q5VVW2 1013 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 C6orf120Q7Z4R8 191 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 LRRC25Q8N386 305 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 OR52N2Q8NGI0 321 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FBXO30Q8TB52 745 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 NETO1Q8TDF5 533 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SLCO4A1Q96BD0 722 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF501Q96CX3 271 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 OR6C1Q96RD1 312 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SEPHS2Q99611 448 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 TACO1Q9BSH4 297 aaKnown RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 YIPF4Q9BSR8 244 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 NDC1Q9BTX1 674 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 CHST8Q9H2A9 424 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ZCCHC3Q9NUD5 404 aaKnown RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
CHMP3-204ENST00000409727 FTSJ1Q9UET6 329 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 ANGPTL2Q9UKU9 493 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 AP4S1Q9Y587 144 aa11.72□□□□□ -0.53
CHMP3-204ENST00000409727 TCRBV5S2A0A599 114 aa11.71□□□□□ -0.53
CHMP3-204ENST00000409727 AQP12BA6NM10 295 aa11.71□□□□□ -0.53
CHMP3-204ENST00000409727 H3BMH7 237 aa11.71□□□□□ -0.53
CHMP3-204ENST00000409727 CDX4O14627 284 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-204ENST00000409727 FLRT2O43155 660 aa11.71□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF749O43361 778 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms