RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 LTB4RQ15722 352 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 GPR19Q15760 415 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 LRRC36Q1X8D7 754 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TCTE1Q5JU00 501 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 OGFRL1Q5TC84 451 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ERMP1Q7Z2K6 904 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 GALNT10Q86SR1 603 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 D2HGDHQ8N465 521 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 OR9A2Q8NGT5 310 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 N4BP2L2Q92802 583 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SLC41A2Q96JW4 573 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ARRDC1-AS1Q9H2J1 176 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 PRDM9Q9NQV7 894 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 DCAF13Q9NV06 445 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SPACA6W5XKT8 324 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 A0A0C4DFX4 3053 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM150CB9EJG8 249 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 FAM227AF5H4B4 570 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 H3BMH7 237 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 PCDHGA12O60330 932 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 MT-ND1P03886 318 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 CCT3P49368 545 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ARL4DP49703 201 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 CCL7P80098 99 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ID2Q02363 134 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TP53BP2Q13625 1128 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 NKG7Q16617 165 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 INAVAQ3KP66 663 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM107Q6UX40 140 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM64Q6YI46 380 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SZRD1Q7Z422 152 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 C6orf120Q7Z4R8 191 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 AMIGO2Q86SJ2 522 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 OR4N5Q8IXE1 308 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 LRRC25Q8N386 305 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 HORMAD2Q8N7B1 307 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 TTC29Q8NA56 475 aaPredicted RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 C11orf65Q8NCR3 313 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 MAGED4Q96JG8 741 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SEMA6AQ9H2E6 1030 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SERHL2Q9H4I8 314 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ZNF768Q9H5H4 540 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SEMA3GQ9NS98 782 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
GPNMB-203ENST00000409458 OLAHQ9NV23 265 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 HCN3Q9P1Z3 774 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 PSME2Q9UL46 239 aa13.24□□□□□ -0.29
GPNMB-203ENST00000409458 SCN2AQ99250 2005 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 HNRNPRO43390 633 aaKnown RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 CHST10O43529 356 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 FGF17O60258 216 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 PRKD3O94806 890 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 NSA2O95478 260 aaKnown RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 BMP2P12643 396 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 FOLR1P15328 257 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 MPIP34949 423 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 MC3RP41968 323 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 XKP51811 444 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 DSTNP60981 165 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 FOLH1Q04609 750 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 EEF1A2Q05639 463 aaKnown RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 VEZF1Q14119 521 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 FAM53BQ14153 422 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 PROX2Q3B8N5 592 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 GARNL3Q5VVW2 1013 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 ZC3H14Q6PJT7 736 aaKnown RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 ZNF574Q6ZN55 896 aaPredicted RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM126BQ8IUX1 230 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 METTL27Q8N6F8 245 aaPredicted RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 NFKBIDQ8NI38 313 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 SFXN5Q8TD22 340 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 PPWD1Q96BP3 646 aaKnown RBP13.23□□□□□ -0.29
GPNMB-203ENST00000409458 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 SLC35G5Q96KT7 338 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 RBCK1Q9BYM8 510 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 ASPSCR1Q9BZE9 553 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 TMEM38AQ9H6F2 299 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 AGPAT4Q9NRZ5 378 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 CLCA2Q9UQC9 943 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 C15orf41Q9Y2V0 281 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 R4GN57 208 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 UNC13CQ8NB66 2214 aa13.23□□□□□ -0.29
GPNMB-203ENST00000409458 FAM149AA5PLN7 773 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 LDB3O75112 727 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 ARAFP10398 606 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 SPTBP11277 2137 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 NELFEP18615 380 aaKnown RBP13.22□□□□□ -0.29
GPNMB-203ENST00000409458 AQP1P29972 269 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 KDELR2P33947 212 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 CRYBA2P53672 197 aa13.22□□□□□ -0.29
GPNMB-203ENST00000409458 MAT1AQ00266 395 aaKnown RBP13.22□□□□□ -0.29
GPNMB-203ENST00000409458 RBBP4Q09028 425 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms