RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 VNN1O95497 513 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 LDOC1O95751 146 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 OLFM2O95897 454 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TRUB2O95900 331 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 GH2P01242 217 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 APOC1P02654 83 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 C2P06681 752 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 MSH3P20585 1137 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CD72P21854 359 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 KELP23276 732 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ATP5F1P24539 256 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 DDX6P26196 483 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLK1-202ENST00000409403 MST1P26927 711 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 OXTRP30559 389 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ICAM3P32942 547 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RPL9P32969 192 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 HAAOP46952 286 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RENBPP51606 427 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ACLYP53396 1101 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 NAGLUP54802 743 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CDH6P55285 790 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SNAP25P60880 206 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 LSM3P62310 102 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 POLR2GP62487 172 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLK1-202ENST00000409403 SLC35A2P78381 396 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CCNA1P78396 465 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RBP5P82980 135 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TFAMQ00059 246 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 OGDHQ02218 1023 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 FOXO1Q12778 655 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 GRIK2Q13002 908 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 DMP1Q13316 513 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 TBCEQ15813 527 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 MEP1AQ16819 746 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 KIF19Q2TAC6 998 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SMTNL2Q2TAL5 461 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 QRICH1Q2TAL8 776 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 BCL7AQ4VC05 210 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 HSD17B12Q53GQ0 312 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ARHGAP15Q53QZ3 475 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 IGSF11Q5DX21 431 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CLLU1Q5K131 121 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 MANEALQ5VSG8 457 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RAP1GAP2Q684P5 730 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TXNRD3NBQ6F5E7 133 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 MZT2BQ6NZ67 158 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF704Q6ZNC4 412 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF534Q76KX8 674 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RRM2BQ7LG56 351 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 C16orf62Q7Z3J2 963 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 NRARPQ7Z6K4 114 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 GPAT4Q86UL3 456 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 COMMD7Q86VX2 200 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SLC22A9Q8IVM8 553 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CDH26Q8IXH8 852 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TAGAPQ8N103 731 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CPEB3Q8NE35 698 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 OR8H1Q8NGG4 311 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 DNAJB14Q8TBM8 379 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SPPL2BQ8TCT7 592 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF606Q8WXB4 792 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 POMGNT1Q8WZA1 660 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 AKAP1Q92667 903 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLK1-202ENST00000409403 TMBIM1Q969X1 311 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 KIAA1143Q96AT1 154 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 INTS12Q96CB8 462 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 MRPL38Q96DV4 380 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 MSANTD3Q96H12 275 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF668Q96K58 619 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 SERPINB11Q96P15 392 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 QKIQ96PU8 341 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLK1-202ENST00000409403 RNF157Q96PX1 679 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 RIT2Q99578 217 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF670Q9BS34 389 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF416Q9BWM5 594 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 MAGEH1Q9H213 219 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 IKZF4Q9H2S9 585 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ZNF703Q9H7S9 590 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 RNF121Q9H920 327 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 UNKLQ9H9P5 680 aaKnown RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 RANGRFQ9HD47 186 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 ACOT13Q9NPJ3 140 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 IFT46Q9NQC8 304 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 CHRAC1Q9NRG0 131 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 PCDHB16Q9NRJ7 776 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 BFARQ9NZS9 450 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 GRHPRQ9UBQ7 328 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ELF5Q9UKW6 265 aaPredicted RBP5.21□□□□□ -1.58
CLK1-202ENST00000409403 RAB23Q9ULC3 237 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 TMEM5Q9Y2B1 443 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 ASB4Q9Y574 426 aa5.21□□□□□ -1.58
CLK1-202ENST00000409403 SPTAN1Q13813 2472 aaKnown RBP5.2□□□□□ -1.58
CLK1-202ENST00000409403 SHROOM3Q8TF72 1996 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 A0A087X1B8 175 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 IGKV6D-41A0A0C4DH26 115 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 A0A0J9YYE9 177 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 KRBOX1C9JBD0 128 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 PTGES3LE9PB15 166 aa5.2□□□□□ -1.58
CLK1-202ENST00000409403 FAM86B1E9PN63 330 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms