RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 POMT2Q9UKY4 750 aa17.91■□□□□ 0.46
USP39-202ENST00000409025 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
USP39-202ENST00000409025 SAMHD1Q9Y3Z3 626 aaKnown RBP17.91■□□□□ 0.46
USP39-202ENST00000409025 HMGN4O00479 90 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 TFPTP0C1Z6 253 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 C8orf89P0DMQ9 161 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 MAGEA8P43361 318 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 RAD23AP54725 363 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 TNFRSF17Q02223 184 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ZNF750Q32MQ0 723 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.9■□□□□ 0.46
USP39-202ENST00000409025 KLHL35Q6PF15 583 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ARMC8Q8IUR7 673 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 OFCC1Q8IZS5 231 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ZNF786Q8N393 782 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 RAB8BQ92930 207 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 TMEM19Q96HH6 336 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 SEMA6CQ9H3T2 930 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 PDE9AO76083 593 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 SEC24DO94855 1032 aaPredicted RBP17.9■□□□□ 0.46
USP39-202ENST00000409025 PGM3O95394 542 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ALOX12P18054 663 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 FASLGP48023 281 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 CXCL12P48061 93 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ANXA11P50995 505 aaKnown RBP17.9■□□□□ 0.46
USP39-202ENST00000409025 PPP1CAP62136 330 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 APOFQ13790 326 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 CEBPEQ15744 281 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ANKRD34AQ69YU3 496 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 CEP68Q76N32 757 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ZNF438Q7Z4V0 828 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 SLC44A2Q8IWA5 706 aaPredicted RBP17.9■□□□□ 0.46
USP39-202ENST00000409025 ARL14Q8N4G2 192 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 TSPAN14Q8NG11 270 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 GEMIN6Q8WXD5 167 aaKnown RBP17.9■□□□□ 0.46
USP39-202ENST00000409025 MAGED4Q96JG8 741 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 ZNF347Q96SE7 839 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 OR51I1Q9H343 314 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 FAM118AQ9NWS6 357 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 MS4A12Q9NXJ0 267 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 KCMF1Q9P0J7 381 aa17.9■□□□□ 0.46
USP39-202ENST00000409025 UBXN7O94888 489 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 ATP6V1B1P15313 513 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 ITGA2P17301 1181 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 MATN1P21941 496 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 TLX1P31314 330 aaPredicted RBP17.89■□□□□ 0.45
USP39-202ENST00000409025 RPL5P46777 297 aaKnown RBP17.89■□□□□ 0.45
USP39-202ENST00000409025 KHKP50053 298 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 LIM2P55344 173 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 SNRPNP63162 240 aaKnown RBP17.89■□□□□ 0.45
USP39-202ENST00000409025 DUSP2Q05923 314 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 UBALD2Q8IYN6 164 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 METTL25Q8N6Q8 603 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 OR56A1Q8NGH5 318 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 ZNF681Q96N22 645 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 MBOAT4Q96T53 435 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 EPYCQ99645 322 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 SERHL2Q9H4I8 314 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 UCK1Q9HA47 277 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 THSD1Q9NS62 852 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 NDUFAF4Q9P032 175 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 PDP1Q9P0J1 537 aaPredicted RBP17.89■□□□□ 0.45
USP39-202ENST00000409025 P2RX2Q9UBL9 471 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 TRPC4Q9UBN4 977 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 ZNF451Q9Y4E5 1061 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 PCDHGB3Q9Y5G1 929 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 SCN3AQ9NY46 2000 aa17.89■□□□□ 0.45
USP39-202ENST00000409025 EME2A4GXA9 379 aaPredicted RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 VGLL3A8MV65 326 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 C9P02748 559 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 FHP07954 510 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 OR12D1P0DN82 309 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 ALPPL2P10696 532 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 CDH3P22223 829 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 PRKAG1P54619 331 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 NXPH1P58417 271 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 HNRNPKP61978 463 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP39-202ENST00000409025 RUNX2Q13950 521 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 KCTD21Q4G0X4 260 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 LIN52Q52LA3 116 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 RPS26P11Q5JNZ5 115 aaPredicted RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 SAMD14Q8IZD0 417 aaPredicted RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 CSNK1A1LQ8N752 337 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 SMYD1Q8NB12 490 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 KLHL6Q8WZ60 621 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 MUS81Q96NY9 551 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 BARD1Q99728 777 aaKnown RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 CCDC3Q9BQI4 270 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 C3orf14Q9HBI5 128 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 TMEFF2Q9UIK5 374 aaPredicted RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 DAPP1Q9UN19 280 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 CEP192Q8TEP8 1941 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 ADAMDEC1O15204 470 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 EMC8O43402 210 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 SLC28A2O43868 658 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 TNFRSF1BP20333 461 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 IGFBP5P24593 272 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 RRM2P31350 389 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 OR1E2P47887 323 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms