RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RNF11Q9Y3C5 154 aa8.43□□□□□ -1.06
SNORD88A-201ENST00000408314 H3BQF6 201 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 KRT6AP02538 564 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 KRT6BP04259 564 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 IGKV3-11P04433 115 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 GSTA1P08263 222 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC35E2P0CK97 266 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SERPINB3P29508 390 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ECHS1P30084 290 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 PTGS2P35354 604 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 PTGER4P35408 488 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 BSGP35613 385 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SOX3P41225 446 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 KRT6CP48668 564 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 MAPK12P53778 367 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 HNRNPH2P55795 449 aaKnown RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 NRG3P56975 720 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 HERVK_113P63132 956 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 TRAF3Q13114 568 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 RASA2Q15283 850 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CCNYL2Q5T2Q4 361 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 MRM1Q6IN84 353 aaKnown RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM47EQ6ZV65 393 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF227Q86WZ6 799 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 GALNT12Q8IXK2 581 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SAMD14Q8IZD0 417 aaPredicted RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 PLD6Q8N2A8 252 aaKnown RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM109AQ8N4B1 249 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 EIF1ADQ8N9N8 165 aaKnown RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM57AQ8TBR7 257 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 TRPC4APQ8TEL6 797 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF721Q8TF20 911 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SELENOMQ8WWX9 145 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CCDC126Q96EE4 140 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 DTNBP1Q96EV8 351 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SENP5Q96HI0 755 aaPredicted RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CNPPD1Q9BV87 410 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 FAIM2Q9BWQ8 316 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ERVK-6Q9BXR3 956 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SHCBP1LQ9BZQ2 653 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 SEMA4BQ9NPR2 832 aaPredicted RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CNIH4Q9P003 139 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 B4GALT7Q9UBV7 327 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 TINAGQ9UJW2 476 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 BOKQ9UMX3 212 aaPredicted RBP8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CFL2Q9Y281 166 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 ATG4BQ9Y4P1 393 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 CENPEQ02224 2701 aa8.42□□□□□ -1.06
SNORD88A-201ENST00000408314 MYO7BQ6PIF6 2116 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 C1orf226A1L170 272 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR14I1A6ND48 311 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 LRRC14BA6NHZ5 514 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CYSRT1A8MQ03 144 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 A8MT66 165 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 FAM47E-STBD1D6RA91 191 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR7A17O14581 309 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 TP53I11O14683 189 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 BCKDKO14874 412 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 RIPK2O43353 540 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 HS6ST1O60243 411 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 PRKNO60260 465 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CDH16O75309 829 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 EEDO75530 441 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR6B1O95007 311 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ETHE1O95571 254 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 AIFM1O95831 613 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ENO1P06733 434 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 TPOP07202 933 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CNR1P21554 472 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ATP5F1P24539 256 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 PTGER1P34995 402 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 GPR85P60893 370 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 PPIAP62937 165 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ERVK-8P63133 956 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ID2Q02363 134 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ASPHQ12797 758 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 CSTF3Q12996 717 aaKnown RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF267Q14586 743 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF630Q2M218 657 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 TEX35Q5T0J7 233 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 SLC22A10Q63ZE4 541 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 C18orf63Q68DL7 685 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 ZNF787Q6DD87 383 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 MDGA2Q7Z553 956 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR4N5Q8IXE1 308 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 METTL4Q8N3J2 472 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 AMER2Q8N7J2 671 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR2M7Q8NG81 312 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR7G1Q8NGA0 311 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR4F6Q8NGB9 312 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR4K14Q8NGD5 310 aa8.41□□□□□ -1.06
SNORD88A-201ENST00000408314 OR52B6Q8NGF0 335 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms