RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CDC123O75794 336 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR6B1O95007 311 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SEC24AO95486 1093 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 GUCA1CO95843 209 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 EPOP01588 193 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 HEXBP07686 556 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 ODC1P11926 461 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SKILP12757 684 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 FCARP24071 287 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR3A2P47893 321 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR1D5P58170 312 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 ERVFC1-1P60608 527 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 HSPA14Q0VDF9 509 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 MEF2DQ14814 521 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 NECTIN1Q15223 517 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 C9orf50Q5SZB4 431 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 LYPLAL1Q5VWZ2 237 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 NKAIN2Q5VXU1 208 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 PLPP4Q5VZY2 271 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 HIST2H2AA3Q6FI13 130 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR4C11Q6IEV9 310 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 IRGCQ6NXR0 463 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 ABRAXAS1Q6UWZ7 409 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 CEACAM20Q6UY09 585 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 WDR88Q6ZMY6 472 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 C1orf186Q6ZWK4 172 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 LMNTD2Q8IXW0 634 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 COLGALT1Q8NBJ5 622 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR5AP2Q8NGF4 316 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR6M1Q8NGM8 313 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SYAP1Q96A49 352 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 OMA1Q96E52 524 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 RPGRIP1Q96KN7 1286 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 UHRF2Q96PU4 802 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SSX3Q99909 188 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 NTMT1Q9BV86 223 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 UPF3BQ9BZI7 483 aaKnown RBP4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 NACA2Q9H009 215 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 MMP28Q9H239 520 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 DPH5Q9H2P9 285 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 S100A14Q9HCY8 104 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 NGBQ9NPG2 151 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 EPHA6Q9UF33 1036 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM153AQ9UHL3 310 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SH3BGRL2Q9UJC5 107 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 C2CD2Q9Y426 696 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 KIAA1217Q5T5P2 1943 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 VIRMAQ69YN4 1812 aaKnown RBP4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 STK36Q9NRP7 1315 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 LTN1O94822 1766 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ALS2Q96Q42 1657 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM208AQ9UK61 1670 aaKnown RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 MRC1P22897 1456 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 A0A087WZ39 114 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ATP6AP2A0A1C7CYW4 349 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SERINC4A6NH21 518 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 AP2A2O94973 939 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 NGFP01138 241 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM157CP0CG43 387 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 RALAP11233 206 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 DNAJB1P25685 340 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 CHRNA3P32297 505 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 TNFRSF4P43489 277 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 PITPNBP48739 271 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF131P52739 623 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 GUCY2DQ02846 1103 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SCGB2A2Q13296 93 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 DRP2Q13474 957 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 FHL1Q13642 323 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 HEPACAMQ14CZ8 416 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 EFTUD2Q15029 972 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 DUSP5Q16690 384 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 KLHL40Q2TBA0 621 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF718Q3SXZ3 478 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 LRRC37A5PQ49AS3 106 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM106AQ4KMX7 169 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 MPPE1Q53F39 396 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 TAF1BQ53T94 588 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 C1orf189Q5VU69 101 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC25A47Q6Q0C1 308 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 TMEM64Q6YI46 380 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SYVN1Q86TM6 617 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 RAB42Q8N4Z0 105 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 Q8N9P0 234 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR56B1Q8NGI3 324 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR10V1Q8NGI7 309 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR2T11Q8NH01 316 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 GATAD1Q8WUU5 269 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC35C1Q96A29 364 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF274Q96GC6 653 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 SENP5Q96HI0 755 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 BOLA2Q9H3K6 86 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF556Q9HAH1 456 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 MAN2C1Q9NTJ4 1040 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 VPS54Q9P1Q0 977 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 COPS7AQ9UBW8 275 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 PSORS1C1Q9UIG5 152 aa4.19□□□□□ -1.74
HMGB3P18-201ENST00000406327 PILRAQ9UKJ1 303 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms