RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C17orf64Q86WR6 236 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 METTL4Q8N3J2 472 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 LRRC17Q8N6Y2 441 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 CHDHQ8NE62 594 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR10G7Q8NGN6 311 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 SSC4DQ8WTU2 575 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 PHYHIPQ92561 330 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 P3H4Q92791 437 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 PNPLA2Q96AD5 504 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 NAF1Q96HR8 494 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 PRICKLE1Q96MT3 831 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 AGAP4Q96P64 663 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 IWS1Q96ST2 819 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 KRT12Q99456 494 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 NLNQ9BYT8 704 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 CNOT2Q9NZN8 540 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 ACTR3BQ9P1U1 418 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 KIF26BQ2KJY2 2108 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 MYH15Q9Y2K3 1946 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRBV5-4A0A0C4DH59 114 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 K7ERI5 159 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 SNAP91O60641 907 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 AKR7A3O95154 331 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 IGHG3P01860 377 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 PKLRP30613 574 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 NPY2RP49146 381 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 RAG2P55895 527 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 GSCP56915 257 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 CD300CQ08708 224 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 RIGQ13278 110 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 SMC1AQ14683 1233 aaKnown RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 FASTKD3Q14CZ7 662 aaKnown RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCDC6Q16204 474 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TEX35Q5T0J7 233 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 NEK5Q6P3R8 708 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF497Q6ZNH5 498 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 LRRTM1Q86UE6 522 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 SLC22A16Q86VW1 577 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TBC1D10CQ8IV04 446 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNRF1Q8ND25 227 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 CNNM3Q8NE01 707 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TCP11Q8WWU5 503 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 NABP1Q96AH0 204 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMEM45BQ96B21 275 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 RCHY1Q96PM5 261 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ALKBH3Q96Q83 286 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 SYT11Q9BT88 431 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMEM231Q9H6L2 316 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 TAS2R16Q9NYV7 291 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ERVK-18Q9QC07 812 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 IKZF3Q9UKT9 509 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 NIP7Q9Y221 180 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 PLEKHA6Q9Y2H5 1048 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 SLC6A5Q9Y345 797 aa3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 MRPS2Q9Y399 296 aaKnown RBP3.23□□□□□ -1.89
HMGB1P17-201ENST00000403495 ATP8B3O60423 1300 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 LOC105371242A0A075B767 164 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 IGLON5A6NGN9 336 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 MEI4A8MW99 385 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FBP2O00757 339 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCSO14618 274 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 TFECO14948 347 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 TXNL1O43396 289 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 NME2P1O60361 137 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 CSDE1O75534 798 aaKnown RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 IFNB1P01574 187 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 MBL2P11226 248 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FCARP24071 287 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FCGR2BP31994 310 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FCGR2CP31995 323 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 PRDX2P32119 198 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 ATP4BP51164 291 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMEM50BP56557 158 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 IRX1P78414 480 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FKBP3Q00688 224 aaKnown RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 SPP2Q13103 211 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 RFTN1Q14699 578 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 UPP1Q16831 310 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF528Q3MIS6 628 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 UNC50Q53HI1 259 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 GFI1BQ5VTD9 330 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 HIST2H2AA3Q6FI13 130 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 CATSPER4Q7RTX7 472 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 ERASQ7Z444 233 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 YRDCQ86U90 279 aaKnown RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 LINC00518Q8N0U6 118 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR56B1Q8NGI3 324 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR6F1Q8NGZ6 308 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR4F5Q8NH21 305 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 SPPL2AQ8TCT8 520 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 MIPOL1Q8TD10 442 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 CHPT1Q8WUD6 406 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 RSPH1Q8WYR4 309 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FCGR1BQ92637 280 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 POM121L2Q96KW2 1035 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms