RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CAPN12Q6ZSI9 719 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C22orf34Q6ZV56 151 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LUZP2Q86TE4 346 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LIX1Q8N485 282 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MCUQ8NE86 351 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 OR2L5Q8NG80 312 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 OR5L2Q8NGL0 311 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FAR2Q96K12 515 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MARK4Q96L34 752 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RUNDC3BQ96NL0 473 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 G6PC3Q9BUM1 346 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TSPY26PQ9H489 355 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BOKQ9UMX3 212 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CAMK2AQ9UQM7 478 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TESMINQ9Y4I5 508 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MAGEB16A2A368 324 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PRKRAO75569 313 aaKnown RBP10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IL18BPO95998 194 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FGGP02679 453 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HPNP05981 417 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CCDC175P0C221 793 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GDF1P27539 372 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SLC6A12P48065 614 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NAGLUP54802 743 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MTTPP55157 894 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IL2P60568 153 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PPP2R2BQ00005 443 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 STX4Q12846 297 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NHSL2Q5HYW2 709 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IGDCC3Q8IVU1 814 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LMNTD2Q8IXW0 634 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FAM13CQ8NE31 585 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ATL1Q8WXF7 558 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CCT6BQ92526 530 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HSPBAP1Q96EW2 488 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LRRC46Q96FV0 321 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SERINC2Q96SA4 455 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BDH2Q9BUT1 245 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 REXO4Q9GZR2 422 aaKnown RBP10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MRPS33Q9Y291 106 aaKnown RBP10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MAD1L1Q9Y6D9 718 aa10.86□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NPEPPSL1A6NEC2 478 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CLEC3AO75596 197 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CNOT4O95628 575 aaKnown RBP10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 KRT14P02533 472 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 OPRM1P35372 400 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 STT3AP46977 705 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ZNF75DP51815 510 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FBXW4P57775 412 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ZNF460Q14592 562 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CRYMQ14894 314 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NTRK2Q16620 822 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MSS51Q4VC12 460 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FBXO48Q5FWF7 155 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WIPI1Q5MNZ9 446 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SYDE1Q6ZW31 735 aaPredicted RBP10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ADGRE4PQ86SQ3 457 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CNTN4Q8IWV2 1026 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ZNF441Q8N8Z8 693 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NAT8LQ8N9F0 302 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CALML6Q8TD86 181 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 UCN3Q969E3 161 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ISL2Q96A47 359 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WFIKKN1Q96NZ8 548 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TUBA1CQ9BQE3 449 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FAM167BQ9BTA0 163 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SORBS1Q9BX66 1292 aaKnown RBP10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NT5DC2Q9H857 520 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CALHM2Q9HA72 323 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CNIH4Q9P003 139 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 KCNE2Q9Y6J6 123 aa10.85□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CADP27708 2225 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 A0A1W2PS29 197 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TAPBPO15533 448 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CTIFO43310 598 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SH3BGRLO75368 114 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WDR47O94967 919 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ENO2P09104 434 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EPORP19235 508 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ATP5A1P25705 553 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CCKARP32238 428 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RPL21P46778 160 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FAM27E3Q08E93 113 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SERTAD2Q14140 314 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EBPQ15125 230 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ACKR1Q16570 336 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RNF10Q8N5U6 811 aaKnown RBP10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SLC15A4Q8N697 577 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MAPK1IP1LQ8NDC0 245 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SLC22A8Q8TCC7 542 aa10.84□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ANKRD49Q8WVL7 239 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms