RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CA13Q8N1Q1 262 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 CBR4Q8N4T8 237 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF597Q96LX8 424 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 PRDM9Q9NQV7 894 aa24.16■■□□□ 1.46
CPNE1-205ENST00000401607 ZCCHC3Q9NUD5 404 aaKnown RBP24.16■■□□□ 1.46
CPNE1-205ENST00000401607 PCDH15Q96QU1 1955 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 TMEM229AB2RXF0 380 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 B4GAT1O43505 415 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 MED26O95402 600 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 HOXB6P17509 224 aaKnown RBP24.15■■□□□ 1.46
CPNE1-205ENST00000401607 MPIP34949 423 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 MLLT3P42568 568 aaPredicted RBP24.15■■□□□ 1.46
CPNE1-205ENST00000401607 CFHR1Q03591 330 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 CCDC80Q76M96 950 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 VTCN1Q7Z7D3 282 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 GATAD2AQ86YP4 633 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 DTWD2Q8NBA8 298 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 SFXN5Q8TD22 340 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 AHCYL2Q96HN2 611 aaKnown RBP24.15■■□□□ 1.46
CPNE1-205ENST00000401607 VPS50Q96JG6 964 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 HSH2DQ96JZ2 352 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 C9orf16Q9BUW7 83 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 CHRNA10Q9GZZ6 450 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 SEMA3GQ9NS98 782 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 NLGN3Q9NZ94 848 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 KLHL3Q9UH77 587 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 ZNF639Q9UID6 485 aa24.15■■□□□ 1.46
CPNE1-205ENST00000401607 SGK494L7N484 410 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 TXNDC9O14530 226 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 TLX1P31314 330 aaPredicted RBP24.14■■□□□ 1.46
CPNE1-205ENST00000401607 GPR3P46089 330 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 FOLH1Q04609 750 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 TMTC4Q5T4D3 741 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 ZC3H7AQ8IWR0 971 aaKnown RBP24.14■■□□□ 1.46
CPNE1-205ENST00000401607 OR9A2Q8NGT5 310 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 ZC3H10Q96K80 434 aaKnown RBP24.14■■□□□ 1.46
CPNE1-205ENST00000401607 DNAJB9Q9UBS3 223 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 PLCL2Q9UPR0 1127 aa24.14■■□□□ 1.46
CPNE1-205ENST00000401607 CYR61O00622 381 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 PCBP3P57721 371 aaKnown RBP24.14■■□□□ 1.45
CPNE1-205ENST00000401607 GPR19Q15760 415 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.14■■□□□ 1.45
CPNE1-205ENST00000401607 CYBRD1Q53TN4 286 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 TMEM107Q6UX40 140 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 PACRGLQ8N7B6 248 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 TMEM52Q8NDY8 209 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 OR9A4Q8NGU2 314 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 SLC35G5Q96KT7 338 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 NPLQ9BXD5 320 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-205ENST00000401607 EPB41L1Q9H4G0 881 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 ANKHQ9HCJ1 492 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 A4GALTQ9NPC4 353 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 SOHLH2Q9NX45 425 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 FBXO4Q9UKT5 387 aa24.14■■□□□ 1.45
CPNE1-205ENST00000401607 HMGN4O00479 90 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 RDH16O75452 317 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 CST1P01037 141 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 SHC2P98077 582 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 LTB4RQ15722 352 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 HLA-BQ31612 363 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 SZRD1Q7Z422 152 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 OR4K14Q8NGD5 310 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 SAP25Q8TEE9 199 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 RAB8BQ92930 207 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 TMBIM1Q969X1 311 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 TBC1D20Q96BZ9 403 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 MAGED4Q96JG8 741 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 PDE7BQ9NP56 450 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 RAB26Q9ULW5 256 aa24.13■■□□□ 1.45
CPNE1-205ENST00000401607 CACNA1EQ15878 2313 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 DUX1O43812 170 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 RASAL1O95294 804 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 ZBTB11O95625 1053 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-205ENST00000401607 CSF2RBP32927 897 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 HSPA13P48723 471 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 XKP51811 444 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 MYBPC3Q14896 1274 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 AMZ1Q400G9 498 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 ZDHHC21Q8IVQ6 265 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 OR4N5Q8IXE1 308 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 LRRC25Q8N386 305 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-205ENST00000401607 Q8N9G6 341 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-205ENST00000401607 TAMM41Q96BW9 452 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 ELP4Q96EB1 424 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 IL1RAPQ9NPH3 570 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 ANGPT4Q9Y264 503 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 AP4B1Q9Y6B7 739 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 SPACA6W5XKT8 324 aa24.12■■□□□ 1.45
CPNE1-205ENST00000401607 CASC3O15234 703 aaKnown RBP24.11■■□□□ 1.45
CPNE1-205ENST00000401607 OPN1SWP03999 348 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 MC3RP41968 323 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 GPLD1P80108 840 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 MAPK11Q15759 364 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 USP53Q70EK8 1073 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 CEP68Q76N32 757 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 SLC30A8Q8IWU4 369 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 SAMD14Q8IZD0 417 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-205ENST00000401607 SLC38A5Q8WUX1 472 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 MOAP1Q96BY2 351 aa24.11■■□□□ 1.45
CPNE1-205ENST00000401607 TPD52L3Q96J77 140 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms