RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MROQ9BYG7 248 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GPR89AB7ZAQ6 455 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 NPIPA2E9PIF3 369 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 NPIPA3F8WFD2 350 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GPR89BP0CG08 455 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC35E2BP0CK96 405 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 RIDAP52758 137 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TRA2BP62995 288 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MELKQ14680 651 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CBARPQ8N350 705 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 IGSF21Q96ID5 467 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TXLNGYQ9BZA5 131 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 LATO43561 262 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PRAF2O60831 178 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PRKCGP05129 697 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 NPRL3Q12980 569 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 RAB41Q5JT25 222 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 RNF111Q6ZNA4 994 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CPNE8Q86YQ8 564 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 UBE2J2Q8N2K1 259 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 FTMTQ8N4E7 242 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR52P1PQ8NH57 321 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 FNDC8Q8TC99 324 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM174Q8WUU8 243 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 HMGB4Q8WW32 186 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MAELQ96JY0 434 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SERINC2Q96SA4 455 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SECISBP2Q96T21 854 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM168Q9H0V1 697 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR51B5Q9H339 312 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GPN2Q9H9Y4 310 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CPNE5Q9HCH3 593 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 INPP5EQ9NRR6 644 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GKN1Q9NS71 199 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 FAM86C1Q9NVL1 165 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 WASH4PA8MWX3 477 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PCDH17O14917 1159 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 FGF18O76093 207 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CD3GP09693 182 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PCGF2P35227 344 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC6A8P48029 635 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF169Q14929 603 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 UBXN2BQ14CS0 331 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MFSD13AQ14CX5 517 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 RAB11BQ15907 218 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TBRG1Q3YBR2 411 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM205Q6UW68 189 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SHFQ7M4L6 423 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TAS1R3Q7RTX0 852 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PXKQ7Z7A4 578 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM173Q86WV6 379 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SMPDL3BQ92485 455 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TRIB2Q92519 343 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 HOXB13Q92826 284 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GIMAP5Q96F15 307 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 KLHDC7BQ96G42 594 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 VRK1Q99986 396 aaPredicted RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 XYLT2Q9H1B5 865 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 OR10A4Q9H209 315 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SEC61A2Q9H9S3 476 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMLHEQ9NVH6 421 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 CCDC88AQ3V6T2 1871 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GXYLT2A0PJZ3 443 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MAN2B1O00754 1011 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ALDOAP04075 364 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 GTF2F2P13984 249 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ADH6P28332 368 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 NUDT6P53370 316 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MALLQ13021 153 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 SLC18B1Q6NT16 456 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TRIM74Q86UV6 250 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TRIM73Q86UV7 250 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM156Q8N614 296 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 TMEM203Q969S6 136 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MYADMQ96S97 322 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 ANKRD60Q9BZ19 345 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 MTG2Q9H4K7 406 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 PDE7BQ9NP56 450 aa8.01□□□□□ -1.13
SPTLC3-201ENST00000399002 A0A1B0GVT2 93 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 BLOC1S5-TXNDC5H3BN57 136 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 RNASET2O00584 256 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 AURKAO14965 403 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ZNF623O75123 536 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 FGF4P08620 206 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 NPR2P20594 1047 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 HK3P52790 923 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 TAS2R38P59533 333 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 SELENOVP59797 346 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 PRPS1P60891 318 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 RPS3AP61247 264 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 LRRC73Q5JTD7 316 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 HAGHLQ6PII5 290 aaPredicted RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 OR6N2Q8NGY6 317 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 MUS81Q96NY9 551 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 PINK1Q9BXM7 581 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 CASC3O15234 703 aaKnown RBP8□□□□□ -1.13
SPTLC3-201ENST00000399002 DUX1O43812 170 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 ATP6V1G1O75348 118 aa8□□□□□ -1.13
SPTLC3-201ENST00000399002 BPNT1O95861 308 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms