RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 KCNQ1P51787 676 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 XKP51811 444 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SNRPGP62308 76 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 RPP38P78345 283 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PTCHD3Q3KNS1 767 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SDHAF4Q5VUM1 108 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FRMPD2BQ6IN97 320 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FIBINQ8TAL6 211 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 STOML3Q8TAV4 291 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 GEMIN6Q8WXD5 167 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 KAT2AQ92830 837 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 TCEAL4Q96EI5 215 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF607Q96SK3 696 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 POLR2J3Q9H1A7 115 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PRDM8Q9NQV8 689 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FZD4Q9ULV1 537 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 GPSM3Q9Y4H4 160 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CPSF4LA6NMK7 179 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 A8MUA0 341 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 M0R036 132 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 POP4O95707 220 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CD53P19397 219 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ACRV1P26436 265 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PIGAP37287 484 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ERVK-25P63136 954 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 STK11Q15831 433 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 MPPE1Q53F39 396 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ZCCHC12Q6PEW1 402 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FAM124AQ86V42 546 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FTMTQ8N4E7 242 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 KLHL36Q8N4N3 616 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 WDR48Q8TAF3 677 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 GAL3ST1Q99999 423 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 OR51E2Q9H255 320 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 POLHQ9Y253 713 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SBF1O95248 1867 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 A0A0X1KG70 313 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 MTRF1O75570 445 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 GABRB1P18505 474 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 RPL4P36578 427 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SLC7A9P82251 487 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 KLHL22Q53GT1 634 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 C22orf42Q6IC83 251 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF730Q6ZMV8 503 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CFAP77Q6ZQR2 320 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CCDC190Q86UF4 302 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM17Q86X19 198 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CRIPAKQ8N1N5 446 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SIMC1Q8NDZ2 872 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 OR10H4Q8NGA5 316 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 TTC9Q92623 222 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 RFT1Q96AA3 541 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 UQCC2Q9BRT2 126 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 BRD9Q9H8M2 597 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PCDHB16Q9NRJ7 776 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PCDHGB2Q9Y5G2 931 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 LOC730098B7Z3J9 87 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ALX3O95076 343 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 HLA-DQA2P01906 255 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 CDK1P06493 297 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ARSAP15289 507 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SELPP16109 830 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 RGS6P49758 472 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PCBP3P57721 371 aaKnown RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 VLDLRP98155 873 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 TPBGQ13641 420 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 RIN1Q13671 783 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ATXN7L3Q14CW9 347 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SLC25A24Q6NUK1 477 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PRICKLE2Q7Z3G6 844 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 COMMD2Q86X83 199 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 PM20D2Q8IYS1 436 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 YIPF7Q8N8F6 280 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 ATG10Q9H0Y0 220 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 NEUROD4Q9HD90 331 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 FANCFQ9NPI8 374 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 GULP1Q9UBP9 304 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SEC14L3Q9UDX4 400 aa5.21□□□□□ -1.58
PTPRD-205ENST00000397611 SMLR1H3BR10 107 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 LYRM1O43325 122 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SLC19A2O60779 497 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SNAPC5O75971 98 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ARAFP10398 606 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PGFP49763 221 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PLD1Q13393 1074 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CTU2Q2VPK5 515 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CLEC12AQ5QGZ9 265 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 BCL2L15Q5TBC7 163 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SMARCD3Q6STE5 483 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SUSD1Q6UWL2 747 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PLCZ1Q86YW0 608 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 OR5J2Q8NH18 312 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 C12orf66Q96MD2 445 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GON7Q9BXV9 100 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF350Q9GZX5 532 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SGCEO43556 437 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SLCO2B1O94956 709 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GNRH1P01148 92 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 IL1AP01583 271 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PROS1P07225 676 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms