RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CTRB1P17538 263 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 DGKAP23743 735 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 ALDH3A1P30838 453 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 ARRB2P32121 409 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 HSD17B3P37058 310 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 PLA2G5P39877 138 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 CRATP43155 626 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 ERVFRD-1P60508 538 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 TSPAN5P62079 268 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 EXT1Q16394 746 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 NSUN5P2Q63ZY6 315 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 CTRB2Q6GPI1 263 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 FAM166AQ6J272 317 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 SCYL2Q6P3W7 929 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 BHLHA15Q7RTS1 189 aaPredicted RBP6.33□□□□□ -1.4
SMCO1-201ENST00000397537 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 CHERPQ8IWX8 916 aaKnown RBP6.33□□□□□ -1.4
SMCO1-201ENST00000397537 SVOPQ8N4V2 548 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF808Q8N4W9 903 aaPredicted RBP6.33□□□□□ -1.4
SMCO1-201ENST00000397537 GPRC5AQ8NFJ5 357 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 SENP5Q96HI0 755 aaPredicted RBP6.33□□□□□ -1.4
SMCO1-201ENST00000397537 CEP19Q96LK0 163 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 FRG2BQ96QU4 278 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 HAUS8Q9BT25 410 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 AMBRA1Q9C0C7 1298 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 GAL3ST2Q9H3Q3 398 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 ELOVL3Q9HB03 270 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 OR14J1Q9UGF5 321 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 GPR160Q9UJ42 338 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 PIGLQ9Y2B2 252 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 CA5BQ9Y2D0 317 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 KLK4Q9Y5K2 254 aa6.33□□□□□ -1.4
SMCO1-201ENST00000397537 GOLGA8QA0A0J9YX86 632 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 NEMP2A6NFY4 417 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 MANSC4A6NHS7 340 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 GOLGA8JA6NMD2 632 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 OR10H2O60403 315 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 GOLGA8HP0CJ92 632 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 GMPRP36959 345 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 TPMTP51580 245 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CDH4P55283 916 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 STX17P56962 302 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 LRRC63Q05C16 580 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 KLC1Q07866 573 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 PJVKQ0ZLH3 352 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ITPK1Q13572 414 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 DMC1Q14565 340 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 USF2Q15853 346 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 TATDN3Q17R31 274 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF568Q3ZCX4 644 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 LIPKQ5VXJ0 399 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM268Q5VZI3 342 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ZNF770Q6IQ21 691 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 USP50Q70EL3 339 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SYT12Q8IV01 421 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 LRRC8AQ8IWT6 810 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 FEZF2Q8TBJ5 459 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ENKURQ8TC29 256 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ADAMTS14Q8WXS8 1223 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ATOH1Q92858 354 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CHMP6Q96FZ7 201 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 MED30Q96HR3 178 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CCDC42Q96M95 316 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 VPS35Q96QK1 796 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CCT8L2Q96SF2 557 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 GFI1Q99684 422 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SLC29A1Q99808 456 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CBWD1Q9BRT8 395 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ABHD14AQ9BUJ0 271 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SLC2A11Q9BYW1 496 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ACTR5Q9H9F9 607 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 KCNK12Q9HB15 430 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 DMAP1Q9NPF5 467 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SLC2A8Q9NY64 477 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 ERVK-11Q9UQG0 969 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 LRP12Q9Y561 859 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 FADS3Q9Y5Q0 445 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SALL1Q9NSC2 1324 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 FER1L6Q2WGJ9 1857 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 GOLGA8IPA6NC78 632 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 SNTNA6NMZ2 147 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 KMOO15229 486 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 OR1F1O43749 312 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 RBBP9O75884 186 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 MOCS2O96007 188 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 PLEKP08567 350 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 AMD1P17707 334 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 DCTDP32321 178 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 TNNC1P63316 161 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 HLXQ14774 488 aaPredicted RBP6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CASP8Q14790 479 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 PTGISQ16647 500 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 METRNLQ641Q3 311 aa6.32□□□□□ -1.4
SMCO1-201ENST00000397537 CES5AQ6NT32 575 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms