RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FAM86B1Q8N7N1 296 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 NT5CQ8TCD5 201 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 PANX1Q96RD7 426 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 MACROD1Q9BQ69 325 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 BHLHE41Q9C0J9 482 aaPredicted RBP14.1□□□□□ -0.15
CAPN3-207ENST00000397200 OR51B5Q9H339 312 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 MYNNQ9NPC7 610 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 FGF21Q9NSA1 209 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 CLCA2Q9UQC9 943 aa14.1□□□□□ -0.15
CAPN3-207ENST00000397200 EFCAB7A8K855 629 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 GABRR3A8MPY1 467 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 RNASET2O00584 256 aaKnown RBP14.09□□□□□ -0.15
CAPN3-207ENST00000397200 EI24O14681 340 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 P2RX6O15547 441 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 KLHL18O94889 574 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 MYF6P23409 242 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 HKDC1Q2TB90 917 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 SLC36A3Q495N2 470 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 TOR1AIP1Q5JTV8 583 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 MANEAQ5SRI9 462 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 ANXA8L1Q5VT79 327 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 KHDRBS2Q5VWX1 349 aaKnown RBP14.09□□□□□ -0.15
CAPN3-207ENST00000397200 ERICH5Q6P6B1 374 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 ENPP6Q6UWR7 440 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 EID3Q8N140 333 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 GOT1L1Q8NHS2 421 aaPredicted RBP14.09□□□□□ -0.15
CAPN3-207ENST00000397200 FAM162AQ96A26 154 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 ZNF285Q96NJ3 590 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 CMKLR1Q99788 373 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 TBCDQ9BTW9 1192 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 ADI1Q9BV57 179 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 MRPS26Q9BYN8 205 aaKnown RBP14.09□□□□□ -0.15
CAPN3-207ENST00000397200 SLC6A16Q9GZN6 736 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 CHST8Q9H2A9 424 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 STARD5Q9NSY2 213 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 SIDT1Q9NXL6 827 aaKnown RBP14.09□□□□□ -0.15
CAPN3-207ENST00000397200 SERTAD3Q9UJW9 196 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 DMXL1Q9Y485 3027 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 CEP250Q9BV73 2442 aa14.09□□□□□ -0.15
CAPN3-207ENST00000397200 LRIT2A6NDA9 550 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 URADA6NGE7 173 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 EVPLLA8MZ36 301 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 CLIC1O00299 241 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 ZSCAN9O15535 394 aaPredicted RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 OR2B3O76000 313 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 SEMA3DO95025 777 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 TBX6O95947 436 aaPredicted RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 HPRP00739 348 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 CTSBP07858 339 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 PABPC4LP0CB38 370 aaKnown RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 RPL3P39023 403 aaKnown RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 MAGEA2P43356 314 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 ITGA1P56199 1179 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 MERTKQ12866 999 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 HYAL2Q12891 473 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 LIN52Q52LA3 116 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 TMEM35AQ53FP2 167 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 CPTPQ5TA50 214 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 DEPDC1Q5TB30 811 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 RNF220Q5VTB9 566 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 IKBIPQ70UQ0 350 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 ZZZ3Q8IYH5 903 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 GPR135Q8IZ08 494 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 CLECL1Q8IZS7 167 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 TTC29Q8NA56 475 aaPredicted RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 ZNF501Q96CX3 271 aaPredicted RBP14.08□□□□□ -0.15
CAPN3-207ENST00000397200 MTERF3Q96E29 417 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 SLC47A1Q96FL8 570 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 OR6C1Q96RD1 312 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 F2RL3Q96RI0 385 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 REEP4Q9H6H4 257 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 PNPLA3Q9NST1 481 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 OCIAD1Q9NX40 245 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 DNAJB9Q9UBS3 223 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 V9GYQ6 96 aa14.08□□□□□ -0.15
CAPN3-207ENST00000397200 SAP18O00422 153 aaKnown RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 MT-ND1P03886 318 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 FURINP09958 794 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 TGM3Q08188 693 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 PRTGQ2VWP7 1150 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 ADPRMQ3LIE5 342 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 PTOV1Q86YD1 416 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 KCT2Q8NC54 265 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 SRFBP1Q8NEF9 429 aaKnown RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 OR1L3Q8NH93 324 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 FBXO30Q8TB52 745 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 MS4A6EQ96DS6 147 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 FAM122AQ96E09 287 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 LIN37Q96GY3 246 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 PRPF18Q99633 342 aaKnown RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 SPRTNQ9H040 489 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 KLHL31Q9H511 634 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 SMPD3Q9NY59 655 aaPredicted RBP14.08□□□□□ -0.16
CAPN3-207ENST00000397200 AHSPQ9NZD4 102 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 RARRES3Q9UL19 164 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 CORO2BQ9UQ03 480 aa14.08□□□□□ -0.16
CAPN3-207ENST00000397200 LOXL2Q9Y4K0 774 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms