RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 GKN1Q9NS71 199 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TLR6Q9Y2C9 796 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CEBPZOSA8MTT3 80 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CAPN5O15484 640 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 AMY2AP04746 511 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 PAX3P23760 479 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 OAZ1P54368 228 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 RPS24P62847 133 aaKnown RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 ACY1Q03154 408 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 KIAA0895LQ68EN5 471 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 FBXW12Q6X9E4 464 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 LRIG1Q96JA1 1093 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 MAGEH1Q9H213 219 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SUV39H2Q9H5I1 410 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 KCNK13Q9HB14 408 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SEC14L4Q9UDX3 406 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 DBHP09172 617 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 LIPCP11150 499 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CDK2P24941 298 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 EOGTQ5NDL2 527 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 ZNF705AQ6ZN79 300 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 USP50Q70EL3 339 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 GLB1L3Q8NCI6 653 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 ZNF641Q96N77 438 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 DYNLRB1Q9NP97 96 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CRTAPO75718 401 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 P04436 131 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CD9P21926 228 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 PRPH2P23942 346 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 RAB28P51157 221 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 OR4D2P58180 307 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 DUOXA1Q1HG43 343 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SPIN4Q56A73 249 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SMG8Q8ND04 991 aaKnown RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 BTBD2Q9BX70 525 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 VSX1Q9NZR4 365 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 CASZ1Q86V15 1759 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 TSTD3H0UI37 97 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SLC7A4O43246 635 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 ADRB3P13945 408 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SFTPDP35247 375 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 PITPNBP48739 271 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 EPHA4P54764 986 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 INHBEP58166 350 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 CNEP1R1Q8N9A8 125 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 OR4K1Q8NGD4 311 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 RPLP0P6Q8NHW5 317 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 TFGQ92734 400 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 DIO2Q92813 273 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 RHBDF1Q96CC6 855 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 VRK1Q99986 396 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 ZNF559Q9BR84 538 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 THUMPD1Q9NXG2 353 aaKnown RBP11.85□□□□□ -0.51
SMU1-201ENST00000397149 LCATP04180 440 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 IL3P08700 152 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 OR12D1P0DN82 309 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 IL17RBQ9NRM6 502 aa11.85□□□□□ -0.51
SMU1-201ENST00000397149 SERPINA12Q8IW75 414 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 BPIFA2Q96DR5 249 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 FAM71F1Q96KD3 344 aaPredicted RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 CNTNAP3BQ96NU0 1288 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 TAS2R9Q9NYW1 312 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 TESQ9UGI8 421 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 NUPL2O15504 423 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 TFPTP0C1Z6 253 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 RPL13AP40429 203 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 TAS2R43P59537 309 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 NOGQ13253 232 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 KIAA1614Q5VZ46 1190 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 HORMAD2Q8N7B1 307 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 CANT1Q8WVQ1 401 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 SMIM28A0A1B0GU29 152 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 FAM171A2A8MVW0 826 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 APEHP13798 732 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 JUNDP17535 347 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 PIM3Q86V86 326 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 PLD5Q8N7P1 536 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 TXNDC15Q96J42 360 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 ASTN1O14525 1302 aa11.84□□□□□ -0.51
SMU1-201ENST00000397149 TERTO14746 1132 aaKnown RBP11.84□□□□□ -0.51
SMU1-201ENST00000397149 RAB3BP20337 219 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms