RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC1A6P48664 564 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 RASSF2P50749 326 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 CLCN2P51788 898 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 ELOAQ14241 798 aaKnown RBP13.6□□□□□ -0.23
SEC13-208ENST00000397109 NR6A1Q15406 480 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 FHL5Q5TD97 284 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 FRG2Q64ET8 278 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 GPR180Q86V85 440 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 FITM2Q8N6M3 262 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 DAZLQ92904 295 aaKnown RBP13.6□□□□□ -0.23
SEC13-208ENST00000397109 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 CDK15Q96Q40 435 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 FRG2BQ96QU4 278 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 MECRQ9BV79 373 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 NPHS2Q9NP85 383 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 SEMA4BQ9NPR2 832 aaPredicted RBP13.6□□□□□ -0.23
SEC13-208ENST00000397109 LYARQ9NX58 379 aaKnown RBP13.6□□□□□ -0.23
SEC13-208ENST00000397109 VTI1BQ9UEU0 232 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 FBXW2Q9UKT8 454 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 CLCA3PQ9Y6N3 262 aa13.6□□□□□ -0.23
SEC13-208ENST00000397109 ZGRF1Q86YA3 2104 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 SPENQ96T58 3664 aaKnown RBP13.59□□□□□ -0.23
SEC13-208ENST00000397109 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 ANKUB1A6NFN9 424 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 CFAP73A6NFT4 308 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 GABRR3A8MPY1 467 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 TGFBR3LH3BV60 316 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 FCHO1O14526 889 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 PPP2R1BP30154 601 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
SEC13-208ENST00000397109 NEK2P51955 445 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 ABCE1P61221 599 aaKnown RBP13.59□□□□□ -0.23
SEC13-208ENST00000397109 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 UNC50Q53HI1 259 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 TUBA3EQ6PEY2 450 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 CLNKQ7Z7G1 428 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 ARMC10Q8N2F6 343 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 KIF2BQ8N4N8 673 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 APCDD1LQ8NCL9 501 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 OR4F6Q8NGB9 312 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 DNAJB8Q8NHS0 232 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 TANKQ92844 425 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 NPAS2Q99743 824 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
SEC13-208ENST00000397109 AHSPQ9NZD4 102 aa13.59□□□□□ -0.23
SEC13-208ENST00000397109 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.59□□□□□ -0.23
SEC13-208ENST00000397109 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 CCDC22O60826 627 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 ZFAND5O76080 213 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 RASAL1O95294 804 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 CRYABP02511 175 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 EDN3P14138 238 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 CD46P15529 392 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 BSGP35613 385 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 CD96P40200 585 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 NAGLUP54802 743 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 CDH13P55290 713 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 MLF1P58340 268 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 OC90Q02509 493 aaPredicted RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 CLCQ05315 142 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 ZNF766Q5HY98 468 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 MRM1Q6IN84 353 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 CYP20A1Q6UW02 462 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 FRMD7Q6ZUT3 714 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 MTFMTQ96DP5 389 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 TRMOQ9BU70 441 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 GATA5Q9BWX5 397 aaPredicted RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 SORBS1Q9BX66 1292 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 GSTO2Q9H4Y5 243 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 WDR41Q9HAD4 459 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 TRPS1Q9UHF7 1281 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 SNX6Q9UNH7 406 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 STK38LQ9Y2H1 464 aa13.58□□□□□ -0.24
SEC13-208ENST00000397109 ASH1LQ9NR48 2969 aaKnown RBP13.58□□□□□ -0.24
SEC13-208ENST00000397109 A0A0A6YYD5 115 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 TRBV11-1A0A0K0K1C0 115 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 LDB3O75112 727 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 SUPT7LO94864 414 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 MLYCDO95822 493 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 FAM58BPP0C7Q3 252 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 COX7A2P14406 83 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 ALOX15P16050 662 aaPredicted RBP13.57□□□□□ -0.24
SEC13-208ENST00000397109 TNNI3P19429 210 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 GPR143P51810 404 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 TNFRSF17Q02223 184 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 GALNT1Q10472 559 aaPredicted RBP13.57□□□□□ -0.24
SEC13-208ENST00000397109 LCP2Q13094 533 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 OR1C1Q15619 314 aa13.57□□□□□ -0.24
SEC13-208ENST00000397109 EIF2S3LQ2VIR3 472 aaKnown RBP13.57□□□□□ -0.24
SEC13-208ENST00000397109 PAGE2Q7Z2X7 111 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms